Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp13P33435 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp13P33435 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp13P33435 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp13P33435 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Mmp13P33435 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp13P33435 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp13P33435 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Mmp13P33435 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.91□□□□□ -0.34
Mmp13P33435 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp13P33435 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp13P33435 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Mmp13P33435 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp13P33435 Gm12203-201ENSMUST00000118235 598 ntBASIC12.91□□□□□ -0.34
Mmp13P33435 Gm12209-201ENSMUST00000120089 596 ntBASIC12.91□□□□□ -0.34
Mmp13P33435 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Mmp13P33435 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp13P33435 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Mmp13P33435 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.91□□□□□ -0.34
Mmp13P33435 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Mmp13P33435 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.91□□□□□ -0.34
Mmp13P33435 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp13P33435 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.91□□□□□ -0.34
Mmp13P33435 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.91□□□□□ -0.34
Mmp13P33435 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Mmp13P33435 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.91□□□□□ -0.34
Mmp13P33435 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp13P33435 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp13P33435 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp13P33435 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp13P33435 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Mmp13P33435 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp13P33435 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.91□□□□□ -0.34
Mmp13P33435 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp13P33435 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.91□□□□□ -0.34
Mmp13P33435 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp13P33435 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp13P33435 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Mmp13P33435 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp13P33435 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp13P33435 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp13P33435 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Mmp13P33435 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Mmp13P33435 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Mmp13P33435 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Mmp13P33435 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.9□□□□□ -0.34
Mmp13P33435 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.9□□□□□ -0.34
Mmp13P33435 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Mmp13P33435 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Mmp13P33435 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.9□□□□□ -0.34
Mmp13P33435 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Mmp13P33435 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Mmp13P33435 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Mmp13P33435 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Mmp13P33435 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Mmp13P33435 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Mmp13P33435 Gm11618-201ENSMUST00000117946 267 ntBASIC12.9□□□□□ -0.34
Mmp13P33435 Gm12291-201ENSMUST00000121627 311 ntBASIC12.9□□□□□ -0.34
Mmp13P33435 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.9□□□□□ -0.34
Mmp13P33435 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.9□□□□□ -0.34
Mmp13P33435 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.9□□□□□ -0.34
Mmp13P33435 Gm40466-201ENSMUST00000212174 422 ntBASIC12.9□□□□□ -0.34
Mmp13P33435 Gm29705-201ENSMUST00000212598 474 ntBASIC12.9□□□□□ -0.34
Mmp13P33435 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.9□□□□□ -0.34
Mmp13P33435 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.9□□□□□ -0.34
Mmp13P33435 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.9□□□□□ -0.34
Mmp13P33435 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Mmp13P33435 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Mmp13P33435 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Mmp13P33435 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Mmp13P33435 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.9□□□□□ -0.34
Mmp13P33435 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Mmp13P33435 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Mmp13P33435 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Mmp13P33435 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Mmp13P33435 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Mmp13P33435 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Mmp13P33435 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp13P33435 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp13P33435 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp13P33435 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp13P33435 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp13P33435 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.89□□□□□ -0.35
Mmp13P33435 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp13P33435 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp13P33435 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.89□□□□□ -0.35
Mmp13P33435 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp13P33435 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp13P33435 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp13P33435 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp13P33435 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp13P33435 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp13P33435 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.89□□□□□ -0.35
Mmp13P33435 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp13P33435 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp13P33435 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp13P33435 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.89□□□□□ -0.35
Mmp13P33435 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp13P33435 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp13P33435 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms