Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.51□□□□□ -0.73
Col8a2P25318 Gm13492-201ENSMUST00000119772 665 ntBASIC10.51□□□□□ -0.73
Col8a2P25318 Gm12715-201ENSMUST00000121430 1128 ntBASIC10.51□□□□□ -0.73
Col8a2P25318 Gm14381-201ENSMUST00000122105 414 ntBASIC10.51□□□□□ -0.73
Col8a2P25318 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.51□□□□□ -0.73
Col8a2P25318 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC10.51□□□□□ -0.73
Col8a2P25318 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Col8a2P25318 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.51□□□□□ -0.73
Col8a2P25318 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.51□□□□□ -0.73
Col8a2P25318 Gm42937-201ENSMUST00000197360 752 ntBASIC10.51□□□□□ -0.73
Col8a2P25318 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Col8a2P25318 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC10.51□□□□□ -0.73
Col8a2P25318 Gm21769-201ENSMUST00000211922 111 ntBASIC10.51□□□□□ -0.73
Col8a2P25318 Gm9004-201ENSMUST00000218739 1222 ntBASIC10.51□□□□□ -0.73
Col8a2P25318 AC093022.5-201ENSMUST00000226841 1079 ntBASIC10.51□□□□□ -0.73
Col8a2P25318 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Col8a2P25318 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Col8a2P25318 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.51□□□□□ -0.73
Col8a2P25318 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
Col8a2P25318 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.51□□□□□ -0.73
Col8a2P25318 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Col8a2P25318 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC10.51□□□□□ -0.73
Col8a2P25318 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC10.51□□□□□ -0.73
Col8a2P25318 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Col8a2P25318 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Col8a2P25318 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.51□□□□□ -0.73
Col8a2P25318 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
Col8a2P25318 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Col8a2P25318 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Col8a2P25318 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Col8a2P25318 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Col8a2P25318 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Col8a2P25318 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Col8a2P25318 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC10.51□□□□□ -0.73
Col8a2P25318 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Col8a2P25318 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Col8a2P25318 Gm9947-201ENSMUST00000067599 2920 ntBASIC10.51□□□□□ -0.73
Col8a2P25318 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Col8a2P25318 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC10.5□□□□□ -0.73
Col8a2P25318 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Col8a2P25318 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Col8a2P25318 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Col8a2P25318 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
Col8a2P25318 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Col8a2P25318 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Col8a2P25318 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Col8a2P25318 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.5□□□□□ -0.73
Col8a2P25318 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Col8a2P25318 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Col8a2P25318 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
Col8a2P25318 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Col8a2P25318 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC10.5□□□□□ -0.73
Col8a2P25318 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Col8a2P25318 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
Col8a2P25318 Gm12012-201ENSMUST00000118857 1066 ntBASIC10.5□□□□□ -0.73
Col8a2P25318 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Col8a2P25318 Gm8018-201ENSMUST00000173536 789 ntBASIC10.5□□□□□ -0.73
Col8a2P25318 Gm9022-201ENSMUST00000182482 992 ntBASIC10.5□□□□□ -0.73
Col8a2P25318 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Col8a2P25318 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC10.5□□□□□ -0.73
Col8a2P25318 Gm45224-201ENSMUST00000208203 414 ntBASIC10.5□□□□□ -0.73
Col8a2P25318 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Col8a2P25318 Gm45925-201ENSMUST00000218882 744 ntBASIC10.5□□□□□ -0.73
Col8a2P25318 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Col8a2P25318 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Col8a2P25318 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Col8a2P25318 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Col8a2P25318 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Col8a2P25318 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.5□□□□□ -0.73
Col8a2P25318 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Col8a2P25318 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Col8a2P25318 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Col8a2P25318 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Col8a2P25318 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC10.5□□□□□ -0.73
Col8a2P25318 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Col8a2P25318 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Col8a2P25318 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Col8a2P25318 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Col8a2P25318 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Col8a2P25318 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Col8a2P25318 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Col8a2P25318 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Col8a2P25318 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.5□□□□□ -0.73
Col8a2P25318 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Col8a2P25318 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC10.49□□□□□ -0.73
Col8a2P25318 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Col8a2P25318 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Col8a2P25318 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Col8a2P25318 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Col8a2P25318 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Col8a2P25318 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
Col8a2P25318 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.49□□□□□ -0.73
Col8a2P25318 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Col8a2P25318 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Col8a2P25318 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Col8a2P25318 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Col8a2P25318 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Col8a2P25318 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Col8a2P25318 Gm12058-201ENSMUST00000118614 437 ntBASIC10.49□□□□□ -0.73
Col8a2P25318 Gm14999-201ENSMUST00000121039 624 ntBASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms