Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clk1P22518 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clk1P22518 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clk1P22518 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Clk1P22518 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clk1P22518 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clk1P22518 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.84□□□□□ -0.51
Clk1P22518 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.84□□□□□ -0.51
Clk1P22518 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clk1P22518 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clk1P22518 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Clk1P22518 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.84□□□□□ -0.51
Clk1P22518 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clk1P22518 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.84□□□□□ -0.51
Clk1P22518 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.84□□□□□ -0.51
Clk1P22518 Gm37497-201ENSMUST00000195830 798 ntBASIC11.84□□□□□ -0.51
Clk1P22518 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.84□□□□□ -0.51
Clk1P22518 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.84□□□□□ -0.51
Clk1P22518 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.84□□□□□ -0.51
Clk1P22518 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clk1P22518 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clk1P22518 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clk1P22518 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clk1P22518 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Clk1P22518 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clk1P22518 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clk1P22518 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.84□□□□□ -0.51
Clk1P22518 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Clk1P22518 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Clk1P22518 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clk1P22518 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Clk1P22518 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Clk1P22518 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.84□□□□□ -0.51
Clk1P22518 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clk1P22518 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.84□□□□□ -0.51
Clk1P22518 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clk1P22518 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Clk1P22518 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Clk1P22518 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Clk1P22518 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clk1P22518 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clk1P22518 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Clk1P22518 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.83□□□□□ -0.51
Clk1P22518 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clk1P22518 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Clk1P22518 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clk1P22518 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clk1P22518 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clk1P22518 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clk1P22518 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clk1P22518 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clk1P22518 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clk1P22518 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
Clk1P22518 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clk1P22518 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clk1P22518 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clk1P22518 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Clk1P22518 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clk1P22518 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clk1P22518 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clk1P22518 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Clk1P22518 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.83□□□□□ -0.52
Clk1P22518 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.83□□□□□ -0.52
Clk1P22518 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Clk1P22518 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.83□□□□□ -0.52
Clk1P22518 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.83□□□□□ -0.52
Clk1P22518 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.83□□□□□ -0.52
Clk1P22518 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Clk1P22518 Gm27847-201ENSMUST00000183711 107 ntBASIC11.83□□□□□ -0.52
Clk1P22518 Gm27375-201ENSMUST00000183799 107 ntBASIC11.83□□□□□ -0.52
Clk1P22518 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.83□□□□□ -0.52
Clk1P22518 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.83□□□□□ -0.52
Clk1P22518 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.83□□□□□ -0.52
Clk1P22518 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.83□□□□□ -0.52
Clk1P22518 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clk1P22518 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Clk1P22518 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Clk1P22518 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Clk1P22518 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clk1P22518 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clk1P22518 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Clk1P22518 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clk1P22518 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Clk1P22518 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.83□□□□□ -0.52
Clk1P22518 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clk1P22518 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Clk1P22518 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.83□□□□□ -0.52
Clk1P22518 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Clk1P22518 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clk1P22518 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Clk1P22518 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clk1P22518 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clk1P22518 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC11.82□□□□□ -0.52
Clk1P22518 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Clk1P22518 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clk1P22518 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clk1P22518 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Clk1P22518 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clk1P22518 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clk1P22518 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms