Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rb1P13405 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rb1P13405 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rb1P13405 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rb1P13405 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rb1P13405 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.99□□□□□ -0.33
Rb1P13405 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rb1P13405 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rb1P13405 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rb1P13405 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rb1P13405 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.98□□□□□ -0.33
Rb1P13405 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Rb1P13405 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rb1P13405 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.98□□□□□ -0.33
Rb1P13405 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rb1P13405 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rb1P13405 Gm37368-201ENSMUST00000193173 3212 ntBASIC12.98□□□□□ -0.33
Rb1P13405 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rb1P13405 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rb1P13405 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.98□□□□□ -0.33
Rb1P13405 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rb1P13405 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rb1P13405 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rb1P13405 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.98□□□□□ -0.33
Rb1P13405 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rb1P13405 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rb1P13405 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Rb1P13405 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Rb1P13405 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.98□□□□□ -0.33
Rb1P13405 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rb1P13405 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rb1P13405 Gm11222-201ENSMUST00000119005 738 ntBASIC12.98□□□□□ -0.33
Rb1P13405 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.98□□□□□ -0.33
Rb1P13405 Gm6222-202ENSMUST00000182143 629 ntBASIC12.98□□□□□ -0.33
Rb1P13405 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.98□□□□□ -0.33
Rb1P13405 Gm38158-201ENSMUST00000194617 339 ntBASIC12.98□□□□□ -0.33
Rb1P13405 Gm4768-201ENSMUST00000206199 686 ntBASIC12.98□□□□□ -0.33
Rb1P13405 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rb1P13405 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.98□□□□□ -0.33
Rb1P13405 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Rb1P13405 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rb1P13405 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Rb1P13405 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rb1P13405 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rb1P13405 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Rb1P13405 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rb1P13405 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rb1P13405 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.98□□□□□ -0.33
Rb1P13405 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rb1P13405 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rb1P13405 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.98□□□□□ -0.33
Rb1P13405 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rb1P13405 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rb1P13405 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rb1P13405 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rb1P13405 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Rb1P13405 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rb1P13405 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rb1P13405 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rb1P13405 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rb1P13405 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.97□□□□□ -0.33
Rb1P13405 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rb1P13405 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rb1P13405 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Rb1P13405 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rb1P13405 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Rb1P13405 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rb1P13405 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rb1P13405 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rb1P13405 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rb1P13405 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.97□□□□□ -0.33
Rb1P13405 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rb1P13405 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rb1P13405 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.97□□□□□ -0.33
Rb1P13405 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rb1P13405 Gm8805-201ENSMUST00000117848 313 ntBASIC12.97□□□□□ -0.33
Rb1P13405 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rb1P13405 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.97□□□□□ -0.33
Rb1P13405 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.97□□□□□ -0.33
Rb1P13405 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rb1P13405 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.97□□□□□ -0.33
Rb1P13405 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rb1P13405 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Rb1P13405 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rb1P13405 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rb1P13405 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rb1P13405 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rb1P13405 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rb1P13405 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rb1P13405 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rb1P13405 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rb1P13405 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rb1P13405 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rb1P13405 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rb1P13405 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.96□□□□□ -0.33
Rb1P13405 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Rb1P13405 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rb1P13405 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rb1P13405 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rb1P13405 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms