Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ly6c1P0CW02 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Ly6c1P0CW02 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ly6c1P0CW02 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Ly6c1P0CW02 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Ly6c1P0CW02 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ly6c1P0CW02 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC10.66□□□□□ -0.7
Ly6c1P0CW02 Gm13316-201ENSMUST00000140537 691 ntBASIC10.66□□□□□ -0.7
Ly6c1P0CW02 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Ly6c1P0CW02 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC10.66□□□□□ -0.7
Ly6c1P0CW02 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Ly6c1P0CW02 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Ly6c1P0CW02 Mir8109-201ENSMUST00000184375 117 ntBASIC10.66□□□□□ -0.7
Ly6c1P0CW02 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC10.66□□□□□ -0.7
Ly6c1P0CW02 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
Ly6c1P0CW02 Olfr284-202ENSMUST00000206647 966 ntBASIC10.66□□□□□ -0.7
Ly6c1P0CW02 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ly6c1P0CW02 Gm44845-201ENSMUST00000208773 335 ntBASIC10.66□□□□□ -0.7
Ly6c1P0CW02 Gm45331-201ENSMUST00000209868 554 ntBASIC10.66□□□□□ -0.7
Ly6c1P0CW02 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC10.66□□□□□ -0.7
Ly6c1P0CW02 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ly6c1P0CW02 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC10.66□□□□□ -0.7
Ly6c1P0CW02 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ly6c1P0CW02 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ly6c1P0CW02 Gm28323-201ENSMUST00000186817 2499 ntBASIC10.66□□□□□ -0.7
Ly6c1P0CW02 Gm3052-202ENSMUST00000188254 2224 ntBASIC10.66□□□□□ -0.7
Ly6c1P0CW02 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ly6c1P0CW02 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ly6c1P0CW02 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ly6c1P0CW02 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC10.66□□□□□ -0.7
Ly6c1P0CW02 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ly6c1P0CW02 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Ly6c1P0CW02 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ly6c1P0CW02 Zkscan3-207ENSMUST00000223831 2101 ntBASIC10.66□□□□□ -0.7
Ly6c1P0CW02 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ly6c1P0CW02 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ly6c1P0CW02 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Ly6c1P0CW02 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ly6c1P0CW02 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ly6c1P0CW02 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Ly6c1P0CW02 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Gm14921-201ENSMUST00000118643 908 ntBASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Gm15061-201ENSMUST00000121076 1046 ntBASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Gm24548-201ENSMUST00000158650 108 ntBASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Gm16296-201ENSMUST00000159905 325 ntBASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Ly6c1P0CW02 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Gm42627-201ENSMUST00000197347 224 ntBASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Gm10297-201ENSMUST00000207136 651 ntBASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Gm6007-201ENSMUST00000208170 823 ntBASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC10.65□□□□□ -0.7
Ly6c1P0CW02 AC159896.2-201ENSMUST00000214753 269 ntBASIC10.65□□□□□ -0.7
Ly6c1P0CW02 AC154319.1-201ENSMUST00000216330 312 ntBASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Ly6c1P0CW02 AL589735.1-201ENSMUST00000224353 270 ntBASIC10.65□□□□□ -0.7
Ly6c1P0CW02 AC132317.1-201ENSMUST00000227227 962 ntBASIC10.65□□□□□ -0.7
Ly6c1P0CW02 AC167013.1-201ENSMUST00000228592 202 ntBASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Gm22058-201ENSMUST00000083393 310 ntBASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ly6c1P0CW02 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.65□□□□□ -0.71
Ly6c1P0CW02 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Ly6c1P0CW02 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Ly6c1P0CW02 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Ly6c1P0CW02 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Ly6c1P0CW02 Gm7002-201ENSMUST00000221386 2165 ntBASIC10.65□□□□□ -0.71
Ly6c1P0CW02 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Ly6c1P0CW02 Gm18222-201ENSMUST00000202416 1387 ntBASIC10.65□□□□□ -0.71
Ly6c1P0CW02 Daam2-202ENSMUST00000224595 1926 ntBASIC10.64□□□□□ -0.71
Ly6c1P0CW02 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms