Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
ApoeP08226 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ApoeP08226 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.94□□□□□ -0.5
ApoeP08226 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ApoeP08226 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ApoeP08226 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.93□□□□□ -0.5
ApoeP08226 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.93□□□□□ -0.5
ApoeP08226 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.93□□□□□ -0.5
ApoeP08226 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
ApoeP08226 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ApoeP08226 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ApoeP08226 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
ApoeP08226 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.93□□□□□ -0.5
ApoeP08226 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.93□□□□□ -0.5
ApoeP08226 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
ApoeP08226 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
ApoeP08226 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
ApoeP08226 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
ApoeP08226 Gm24694-201ENSMUST00000180054 110 ntBASIC11.93□□□□□ -0.5
ApoeP08226 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ApoeP08226 Gm27663-201ENSMUST00000184839 110 ntBASIC11.93□□□□□ -0.5
ApoeP08226 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.93□□□□□ -0.5
ApoeP08226 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.93□□□□□ -0.5
ApoeP08226 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ApoeP08226 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ApoeP08226 Gm16372-201ENSMUST00000073088 450 ntBASIC11.93□□□□□ -0.5
ApoeP08226 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ApoeP08226 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
ApoeP08226 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ApoeP08226 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ApoeP08226 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ApoeP08226 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
ApoeP08226 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ApoeP08226 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ApoeP08226 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
ApoeP08226 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
ApoeP08226 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
ApoeP08226 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
ApoeP08226 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ApoeP08226 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
ApoeP08226 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ApoeP08226 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ApoeP08226 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
ApoeP08226 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ApoeP08226 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.93□□□□□ -0.5
ApoeP08226 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
ApoeP08226 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
ApoeP08226 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ApoeP08226 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ApoeP08226 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ApoeP08226 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ApoeP08226 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
ApoeP08226 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
ApoeP08226 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
ApoeP08226 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.92□□□□□ -0.5
ApoeP08226 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ApoeP08226 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ApoeP08226 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
ApoeP08226 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ApoeP08226 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ApoeP08226 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
ApoeP08226 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ApoeP08226 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
ApoeP08226 Gm22189-201ENSMUST00000103822 86 ntBASIC11.92□□□□□ -0.5
ApoeP08226 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
ApoeP08226 Gm15487-201ENSMUST00000122373 465 ntBASIC11.92□□□□□ -0.5
ApoeP08226 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ApoeP08226 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ApoeP08226 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ApoeP08226 Gm37171-201ENSMUST00000192636 1185 ntBASIC11.92□□□□□ -0.5
ApoeP08226 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ApoeP08226 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ApoeP08226 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ApoeP08226 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ApoeP08226 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ApoeP08226 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.92□□□□□ -0.5
ApoeP08226 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ApoeP08226 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ApoeP08226 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
ApoeP08226 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ApoeP08226 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ApoeP08226 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
ApoeP08226 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ApoeP08226 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
ApoeP08226 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
ApoeP08226 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
ApoeP08226 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
ApoeP08226 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ApoeP08226 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ApoeP08226 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.92□□□□□ -0.5
ApoeP08226 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
ApoeP08226 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ApoeP08226 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
ApoeP08226 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
ApoeP08226 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
ApoeP08226 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ApoeP08226 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
ApoeP08226 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ApoeP08226 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ApoeP08226 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms