Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.53□□□□□ -0.4
Ldb2O55203 Gm11597-201ENSMUST00000121423 964 ntBASIC12.53□□□□□ -0.4
Ldb2O55203 Gm8062-201ENSMUST00000139696 444 ntBASIC12.53□□□□□ -0.4
Ldb2O55203 Rmrp-201ENSMUST00000157463 271 ntBASIC12.53□□□□□ -0.4
Ldb2O55203 Gm6007-201ENSMUST00000208170 823 ntBASIC12.53□□□□□ -0.4
Ldb2O55203 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb2O55203 Gm45930-201ENSMUST00000221330 292 ntBASIC12.53□□□□□ -0.4
Ldb2O55203 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.53□□□□□ -0.4
Ldb2O55203 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ldb2O55203 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ldb2O55203 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb2O55203 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb2O55203 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb2O55203 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb2O55203 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb2O55203 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb2O55203 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb2O55203 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb2O55203 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb2O55203 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb2O55203 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb2O55203 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb2O55203 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ldb2O55203 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb2O55203 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb2O55203 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb2O55203 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Ldb2O55203 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ldb2O55203 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Ldb2O55203 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ldb2O55203 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ldb2O55203 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Ldb2O55203 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Ldb2O55203 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ldb2O55203 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ldb2O55203 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Ldb2O55203 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ldb2O55203 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ldb2O55203 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ldb2O55203 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Ldb2O55203 Gm13315-201ENSMUST00000120376 991 ntBASIC12.52□□□□□ -0.41
Ldb2O55203 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.52□□□□□ -0.41
Ldb2O55203 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.52□□□□□ -0.41
Ldb2O55203 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.52□□□□□ -0.41
Ldb2O55203 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.52□□□□□ -0.41
Ldb2O55203 Gm17420-201ENSMUST00000164753 153 ntBASIC12.52□□□□□ -0.41
Ldb2O55203 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.52□□□□□ -0.41
Ldb2O55203 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.52□□□□□ -0.41
Ldb2O55203 Gm19184-201ENSMUST00000196798 928 ntBASIC12.52□□□□□ -0.41
Ldb2O55203 Gm44405-201ENSMUST00000198952 126 ntBASIC12.52□□□□□ -0.41
Ldb2O55203 Gm44124-201ENSMUST00000204159 472 ntBASIC12.52□□□□□ -0.41
Ldb2O55203 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.52□□□□□ -0.41
Ldb2O55203 Gm5904-201ENSMUST00000210286 865 ntBASIC12.52□□□□□ -0.41
Ldb2O55203 Gm19309-201ENSMUST00000218295 205 ntBASIC12.52□□□□□ -0.41
Ldb2O55203 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ldb2O55203 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.52□□□□□ -0.41
Ldb2O55203 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ldb2O55203 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ldb2O55203 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ldb2O55203 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.41
Ldb2O55203 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ldb2O55203 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb2O55203 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb2O55203 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ldb2O55203 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb2O55203 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb2O55203 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb2O55203 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.51□□□□□ -0.41
Ldb2O55203 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb2O55203 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb2O55203 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb2O55203 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb2O55203 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.51□□□□□ -0.41
Ldb2O55203 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.51□□□□□ -0.41
Ldb2O55203 Gm13736-201ENSMUST00000119272 253 ntBASIC12.51□□□□□ -0.41
Ldb2O55203 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.51□□□□□ -0.41
Ldb2O55203 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.51□□□□□ -0.41
Ldb2O55203 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.51□□□□□ -0.41
Ldb2O55203 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb2O55203 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb2O55203 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.51□□□□□ -0.41
Ldb2O55203 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.51□□□□□ -0.41
Ldb2O55203 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb2O55203 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb2O55203 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb2O55203 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Ldb2O55203 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Ldb2O55203 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb2O55203 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb2O55203 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb2O55203 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ldb2O55203 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb2O55203 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.51□□□□□ -0.41
Ldb2O55203 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb2O55203 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.51□□□□□ -0.41
Ldb2O55203 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb2O55203 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb2O55203 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ldb2O55203 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb2O55203 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms