Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
Limk2O54785 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Limk2O54785 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Limk2O54785 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Limk2O54785 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Limk2O54785 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Limk2O54785 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Limk2O54785 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Limk2O54785 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Limk2O54785 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Limk2O54785 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Limk2O54785 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Limk2O54785 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Limk2O54785 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Limk2O54785 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Limk2O54785 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Limk2O54785 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Limk2O54785 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Limk2O54785 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Limk2O54785 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.8□□□□□ -0.36
Limk2O54785 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Limk2O54785 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Limk2O54785 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Limk2O54785 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Limk2O54785 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Limk2O54785 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Limk2O54785 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Limk2O54785 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Limk2O54785 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Limk2O54785 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Limk2O54785 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Limk2O54785 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.8□□□□□ -0.36
Limk2O54785 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Limk2O54785 Gm11222-201ENSMUST00000119005 738 ntBASIC12.8□□□□□ -0.36
Limk2O54785 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.8□□□□□ -0.36
Limk2O54785 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Limk2O54785 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Limk2O54785 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.8□□□□□ -0.36
Limk2O54785 Gm5363-201ENSMUST00000211927 938 ntBASIC12.8□□□□□ -0.36
Limk2O54785 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.8□□□□□ -0.36
Limk2O54785 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.8□□□□□ -0.36
Limk2O54785 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Limk2O54785 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Limk2O54785 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Limk2O54785 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Limk2O54785 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Limk2O54785 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.8□□□□□ -0.36
Limk2O54785 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Limk2O54785 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Limk2O54785 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Limk2O54785 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Limk2O54785 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Limk2O54785 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Limk2O54785 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Limk2O54785 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Limk2O54785 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Limk2O54785 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.79□□□□□ -0.36
Limk2O54785 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.79□□□□□ -0.36
Limk2O54785 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Limk2O54785 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Limk2O54785 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Limk2O54785 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Limk2O54785 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Limk2O54785 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Limk2O54785 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Limk2O54785 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.79□□□□□ -0.36
Limk2O54785 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Limk2O54785 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Limk2O54785 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Limk2O54785 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Limk2O54785 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Limk2O54785 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Limk2O54785 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Limk2O54785 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Limk2O54785 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Limk2O54785 Gm12997-201ENSMUST00000120207 640 ntBASIC12.79□□□□□ -0.36
Limk2O54785 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Limk2O54785 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Limk2O54785 Mir7070-201ENSMUST00000183657 86 ntBASIC12.79□□□□□ -0.36
Limk2O54785 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Limk2O54785 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Limk2O54785 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.79□□□□□ -0.36
Limk2O54785 Morn2-202ENSMUST00000227729 656 ntBASIC12.79□□□□□ -0.36
Limk2O54785 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Limk2O54785 Daam2-202ENSMUST00000224595 1926 ntBASIC12.79□□□□□ -0.36
Limk2O54785 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Limk2O54785 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Limk2O54785 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.79□□□□□ -0.36
Limk2O54785 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.79□□□□□ -0.36
Limk2O54785 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Limk2O54785 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Limk2O54785 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Limk2O54785 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Limk2O54785 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.79□□□□□ -0.36
Limk2O54785 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Limk2O54785 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Limk2O54785 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Limk2O54785 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
Limk2O54785 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.79□□□□□ -0.36
Limk2O54785 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms