Protein–RNA interactions for Protein: G5E8P0

Tubgcp6, Gamma-tubulin complex component 6, mousemouse

Predictions only

Length 1,769 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp6G5E8P0 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tubgcp6G5E8P0 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tubgcp6G5E8P0 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tubgcp6G5E8P0 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Tubgcp6G5E8P0 Gm5847-201ENSMUST00000178959 1595 ntBASIC17.12■□□□□ 0.33
Tubgcp6G5E8P0 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tubgcp6G5E8P0 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tubgcp6G5E8P0 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC17.12■□□□□ 0.33
Tubgcp6G5E8P0 Gm8731-201ENSMUST00000118088 412 ntBASIC17.12■□□□□ 0.33
Tubgcp6G5E8P0 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tubgcp6G5E8P0 Gm13263-201ENSMUST00000121271 838 ntBASIC17.12■□□□□ 0.33
Tubgcp6G5E8P0 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tubgcp6G5E8P0 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tubgcp6G5E8P0 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tubgcp6G5E8P0 Gm43275-201ENSMUST00000202053 1020 ntBASIC17.12■□□□□ 0.33
Tubgcp6G5E8P0 Gm18204-201ENSMUST00000209835 793 ntBASIC17.12■□□□□ 0.33
Tubgcp6G5E8P0 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Tubgcp6G5E8P0 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tubgcp6G5E8P0 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Tubgcp6G5E8P0 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tubgcp6G5E8P0 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tubgcp6G5E8P0 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tubgcp6G5E8P0 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tubgcp6G5E8P0 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tubgcp6G5E8P0 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tubgcp6G5E8P0 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Tubgcp6G5E8P0 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tubgcp6G5E8P0 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tubgcp6G5E8P0 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.12■□□□□ 0.33
Tubgcp6G5E8P0 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tubgcp6G5E8P0 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tubgcp6G5E8P0 Adra1a-206ENSMUST00000225182 2337 ntBASIC17.12■□□□□ 0.33
Tubgcp6G5E8P0 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tubgcp6G5E8P0 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tubgcp6G5E8P0 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tubgcp6G5E8P0 Gm13549-201ENSMUST00000118339 796 ntBASIC17.12■□□□□ 0.33
Tubgcp6G5E8P0 Gm29410-201ENSMUST00000188383 694 ntBASIC17.12■□□□□ 0.33
Tubgcp6G5E8P0 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tubgcp6G5E8P0 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tubgcp6G5E8P0 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Tubgcp6G5E8P0 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC17.12■□□□□ 0.33
Tubgcp6G5E8P0 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tubgcp6G5E8P0 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tubgcp6G5E8P0 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tubgcp6G5E8P0 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Tubgcp6G5E8P0 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC17.12■□□□□ 0.33
Tubgcp6G5E8P0 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tubgcp6G5E8P0 Gm10305-201ENSMUST00000195331 2475 ntBASIC17.11■□□□□ 0.33
Tubgcp6G5E8P0 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Tubgcp6G5E8P0 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubgcp6G5E8P0 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubgcp6G5E8P0 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tubgcp6G5E8P0 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tubgcp6G5E8P0 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.11■□□□□ 0.33
Tubgcp6G5E8P0 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubgcp6G5E8P0 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tubgcp6G5E8P0 Gm26616-202ENSMUST00000195676 3107 ntBASIC17.11■□□□□ 0.33
Tubgcp6G5E8P0 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC17.11■□□□□ 0.33
Tubgcp6G5E8P0 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Tubgcp6G5E8P0 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubgcp6G5E8P0 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubgcp6G5E8P0 Gm45342-201ENSMUST00000210903 1363 ntBASIC17.11■□□□□ 0.33
Tubgcp6G5E8P0 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubgcp6G5E8P0 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubgcp6G5E8P0 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC17.11■□□□□ 0.33
Tubgcp6G5E8P0 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC17.11■□□□□ 0.33
Tubgcp6G5E8P0 Gm12856-201ENSMUST00000119471 1293 ntBASIC17.11■□□□□ 0.33
Tubgcp6G5E8P0 Gm38228-201ENSMUST00000193169 1293 ntBASIC17.11■□□□□ 0.33
Tubgcp6G5E8P0 Gm44958-201ENSMUST00000203734 736 ntBASIC17.11■□□□□ 0.33
Tubgcp6G5E8P0 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC17.11■□□□□ 0.33
Tubgcp6G5E8P0 Gm45856-201ENSMUST00000212752 416 ntBASIC17.11■□□□□ 0.33
Tubgcp6G5E8P0 CT485606.1-201ENSMUST00000213187 878 ntBASIC17.11■□□□□ 0.33
Tubgcp6G5E8P0 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC17.11■□□□□ 0.33
Tubgcp6G5E8P0 n-R5s211-201ENSMUST00000093689 119 ntBASIC17.11■□□□□ 0.33
Tubgcp6G5E8P0 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubgcp6G5E8P0 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubgcp6G5E8P0 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubgcp6G5E8P0 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubgcp6G5E8P0 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Tubgcp6G5E8P0 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Tubgcp6G5E8P0 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Tubgcp6G5E8P0 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tubgcp6G5E8P0 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubgcp6G5E8P0 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC17.11■□□□□ 0.33
Tubgcp6G5E8P0 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tubgcp6G5E8P0 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubgcp6G5E8P0 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tubgcp6G5E8P0 Gm26286-201ENSMUST00000104166 134 ntBASIC17.1■□□□□ 0.33
Tubgcp6G5E8P0 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC17.1■□□□□ 0.33
Tubgcp6G5E8P0 Gm14274-201ENSMUST00000117182 615 ntBASIC17.1■□□□□ 0.33
Tubgcp6G5E8P0 Gm12030-201ENSMUST00000121917 223 ntBASIC17.1■□□□□ 0.33
Tubgcp6G5E8P0 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC17.1■□□□□ 0.33
Tubgcp6G5E8P0 Gm18201-201ENSMUST00000174735 875 ntBASIC17.1■□□□□ 0.33
Tubgcp6G5E8P0 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC17.1■□□□□ 0.33
Tubgcp6G5E8P0 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC17.1■□□□□ 0.33
Tubgcp6G5E8P0 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC17.1■□□□□ 0.33
Tubgcp6G5E8P0 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Tubgcp6G5E8P0 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC17.1■□□□□ 0.33
Tubgcp6G5E8P0 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tubgcp6G5E8P0 AC121805.2-201ENSMUST00000218808 2538 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 272.4 ms