Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcf11G3X9Z4 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcf11G3X9Z4 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcf11G3X9Z4 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Pcf11G3X9Z4 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Pcf11G3X9Z4 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Pcf11G3X9Z4 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcf11G3X9Z4 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcf11G3X9Z4 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcf11G3X9Z4 AC160405.1-201ENSMUST00000218207 1545 ntBASIC18.77■□□□□ 0.6
Pcf11G3X9Z4 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcf11G3X9Z4 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Pcf11G3X9Z4 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.59
Pcf11G3X9Z4 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Pcf11G3X9Z4 Gm18782-201ENSMUST00000209023 1399 ntBASIC18.77■□□□□ 0.59
Pcf11G3X9Z4 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Pcf11G3X9Z4 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcf11G3X9Z4 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
Pcf11G3X9Z4 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcf11G3X9Z4 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcf11G3X9Z4 Gm28686-201ENSMUST00000187404 609 ntBASIC18.76■□□□□ 0.59
Pcf11G3X9Z4 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcf11G3X9Z4 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Pcf11G3X9Z4 Gm37513-201ENSMUST00000194830 2268 ntBASIC18.76■□□□□ 0.59
Pcf11G3X9Z4 Gm38378-201ENSMUST00000195153 2268 ntBASIC18.76■□□□□ 0.59
Pcf11G3X9Z4 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC18.76■□□□□ 0.59
Pcf11G3X9Z4 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcf11G3X9Z4 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcf11G3X9Z4 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Pcf11G3X9Z4 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcf11G3X9Z4 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC18.76■□□□□ 0.59
Pcf11G3X9Z4 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcf11G3X9Z4 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Pcf11G3X9Z4 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.76■□□□□ 0.59
Pcf11G3X9Z4 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcf11G3X9Z4 Gm9387-201ENSMUST00000098624 1320 ntBASIC18.76■□□□□ 0.59
Pcf11G3X9Z4 Gm3508-201ENSMUST00000186012 792 ntBASIC18.76■□□□□ 0.59
Pcf11G3X9Z4 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcf11G3X9Z4 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC18.76■□□□□ 0.59
Pcf11G3X9Z4 AC098716.1-201ENSMUST00000213527 703 ntBASIC18.76■□□□□ 0.59
Pcf11G3X9Z4 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC18.76■□□□□ 0.59
Pcf11G3X9Z4 AC121960.1-201ENSMUST00000227982 564 ntBASIC18.76■□□□□ 0.59
Pcf11G3X9Z4 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcf11G3X9Z4 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC18.76■□□□□ 0.59
Pcf11G3X9Z4 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcf11G3X9Z4 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcf11G3X9Z4 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Pcf11G3X9Z4 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcf11G3X9Z4 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Pcf11G3X9Z4 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
Pcf11G3X9Z4 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcf11G3X9Z4 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcf11G3X9Z4 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcf11G3X9Z4 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC18.75■□□□□ 0.59
Pcf11G3X9Z4 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcf11G3X9Z4 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcf11G3X9Z4 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcf11G3X9Z4 Gm22144-201ENSMUST00000157402 102 ntBASIC18.75■□□□□ 0.59
Pcf11G3X9Z4 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Pcf11G3X9Z4 AC112945.1-201ENSMUST00000226413 514 ntBASIC18.75■□□□□ 0.59
Pcf11G3X9Z4 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcf11G3X9Z4 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcf11G3X9Z4 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcf11G3X9Z4 AC159195.1-201ENSMUST00000225867 2086 ntBASIC18.75■□□□□ 0.59
Pcf11G3X9Z4 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Pcf11G3X9Z4 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcf11G3X9Z4 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcf11G3X9Z4 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcf11G3X9Z4 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcf11G3X9Z4 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcf11G3X9Z4 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Pcf11G3X9Z4 Gm8731-201ENSMUST00000118088 412 ntBASIC18.74■□□□□ 0.59
Pcf11G3X9Z4 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC18.74■□□□□ 0.59
Pcf11G3X9Z4 Gm15131-201ENSMUST00000119124 595 ntBASIC18.74■□□□□ 0.59
Pcf11G3X9Z4 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC18.74■□□□□ 0.59
Pcf11G3X9Z4 Gm7593-201ENSMUST00000187246 644 ntBASIC18.74■□□□□ 0.59
Pcf11G3X9Z4 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcf11G3X9Z4 AC154290.1-201ENSMUST00000223786 1240 ntBASIC18.74■□□□□ 0.59
Pcf11G3X9Z4 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcf11G3X9Z4 AC158355.1-201ENSMUST00000215895 1705 ntBASIC18.74■□□□□ 0.59
Pcf11G3X9Z4 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcf11G3X9Z4 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcf11G3X9Z4 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcf11G3X9Z4 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcf11G3X9Z4 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcf11G3X9Z4 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Pcf11G3X9Z4 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcf11G3X9Z4 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcf11G3X9Z4 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcf11G3X9Z4 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcf11G3X9Z4 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcf11G3X9Z4 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC18.74■□□□□ 0.59
Pcf11G3X9Z4 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcf11G3X9Z4 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcf11G3X9Z4 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcf11G3X9Z4 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcf11G3X9Z4 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcf11G3X9Z4 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcf11G3X9Z4 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Pcf11G3X9Z4 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms