Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Mir8115-201ENSMUST00000184992 119 ntBASIC11.85□□□□□ -0.51
Colca2F8VPY8 Gm3793-201ENSMUST00000204973 672 ntBASIC11.85□□□□□ -0.51
Colca2F8VPY8 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC11.85□□□□□ -0.51
Colca2F8VPY8 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Colca2F8VPY8 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Colca2F8VPY8 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.85□□□□□ -0.51
Colca2F8VPY8 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Colca2F8VPY8 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Colca2F8VPY8 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Colca2F8VPY8 Mirlet7i-201ENSMUST00000083472 85 ntBASIC11.85□□□□□ -0.51
Colca2F8VPY8 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Colca2F8VPY8 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Colca2F8VPY8 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Colca2F8VPY8 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Colca2F8VPY8 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Colca2F8VPY8 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Colca2F8VPY8 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Colca2F8VPY8 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Colca2F8VPY8 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Colca2F8VPY8 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Colca2F8VPY8 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Colca2F8VPY8 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Colca2F8VPY8 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Colca2F8VPY8 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Colca2F8VPY8 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Colca2F8VPY8 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Colca2F8VPY8 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Colca2F8VPY8 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Colca2F8VPY8 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Colca2F8VPY8 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Colca2F8VPY8 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Colca2F8VPY8 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Colca2F8VPY8 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Colca2F8VPY8 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Colca2F8VPY8 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Colca2F8VPY8 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Colca2F8VPY8 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Colca2F8VPY8 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Colca2F8VPY8 Gm11949-201ENSMUST00000117640 372 ntBASIC11.84□□□□□ -0.51
Colca2F8VPY8 Gm16071-201ENSMUST00000119589 793 ntBASIC11.84□□□□□ -0.51
Colca2F8VPY8 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC11.84□□□□□ -0.51
Colca2F8VPY8 Gm6771-201ENSMUST00000182716 1001 ntBASIC11.84□□□□□ -0.51
Colca2F8VPY8 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC11.84□□□□□ -0.51
Colca2F8VPY8 Gm17826-201ENSMUST00000189720 798 ntBASIC11.84□□□□□ -0.51
Colca2F8VPY8 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC11.84□□□□□ -0.51
Colca2F8VPY8 Gm43520-201ENSMUST00000197996 164 ntBASIC11.84□□□□□ -0.51
Colca2F8VPY8 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.84□□□□□ -0.51
Colca2F8VPY8 Gm18711-201ENSMUST00000199341 750 ntBASIC11.84□□□□□ -0.51
Colca2F8VPY8 Gm8956-201ENSMUST00000203939 825 ntBASIC11.84□□□□□ -0.51
Colca2F8VPY8 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC11.84□□□□□ -0.51
Colca2F8VPY8 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Colca2F8VPY8 Gm9797-202ENSMUST00000218003 294 ntBASIC11.84□□□□□ -0.51
Colca2F8VPY8 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.84□□□□□ -0.51
Colca2F8VPY8 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Colca2F8VPY8 Gm5705-201ENSMUST00000066241 711 ntBASIC11.84□□□□□ -0.51
Colca2F8VPY8 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Colca2F8VPY8 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.84□□□□□ -0.51
Colca2F8VPY8 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.84□□□□□ -0.51
Colca2F8VPY8 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Colca2F8VPY8 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Colca2F8VPY8 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Colca2F8VPY8 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Colca2F8VPY8 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Colca2F8VPY8 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Colca2F8VPY8 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.84□□□□□ -0.51
Colca2F8VPY8 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Colca2F8VPY8 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Colca2F8VPY8 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Colca2F8VPY8 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Colca2F8VPY8 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Colca2F8VPY8 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Colca2F8VPY8 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Colca2F8VPY8 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.83□□□□□ -0.52
Colca2F8VPY8 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Colca2F8VPY8 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Colca2F8VPY8 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Colca2F8VPY8 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.83□□□□□ -0.52
Colca2F8VPY8 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Colca2F8VPY8 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Colca2F8VPY8 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Colca2F8VPY8 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Colca2F8VPY8 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Colca2F8VPY8 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Colca2F8VPY8 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Colca2F8VPY8 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Colca2F8VPY8 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Colca2F8VPY8 Gm13182-201ENSMUST00000122241 312 ntBASIC11.83□□□□□ -0.52
Colca2F8VPY8 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Colca2F8VPY8 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Colca2F8VPY8 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC11.83□□□□□ -0.52
Colca2F8VPY8 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Colca2F8VPY8 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.83□□□□□ -0.52
Colca2F8VPY8 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.83□□□□□ -0.52
Colca2F8VPY8 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.83□□□□□ -0.52
Colca2F8VPY8 Gm9645-201ENSMUST00000197131 792 ntBASIC11.83□□□□□ -0.52
Colca2F8VPY8 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC11.83□□□□□ -0.52
Colca2F8VPY8 Gm19091-201ENSMUST00000208120 978 ntBASIC11.83□□□□□ -0.52
Colca2F8VPY8 Gm6867-201ENSMUST00000219165 425 ntBASIC11.83□□□□□ -0.52
Colca2F8VPY8 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Colca2F8VPY8 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms