Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc149F6V035 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc149F6V035 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc149F6V035 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc149F6V035 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc149F6V035 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc149F6V035 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ccdc149F6V035 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc149F6V035 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc149F6V035 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc149F6V035 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc149F6V035 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ccdc149F6V035 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc149F6V035 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.82□□□□□ -0.36
Ccdc149F6V035 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.81□□□□□ -0.36
Ccdc149F6V035 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.81□□□□□ -0.36
Ccdc149F6V035 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Gm12314-201ENSMUST00000118104 538 ntBASIC12.81□□□□□ -0.36
Ccdc149F6V035 Gm15703-201ENSMUST00000120250 880 ntBASIC12.81□□□□□ -0.36
Ccdc149F6V035 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Mir5132-201ENSMUST00000175166 71 ntBASIC12.81□□□□□ -0.36
Ccdc149F6V035 Mir7070-201ENSMUST00000183657 86 ntBASIC12.81□□□□□ -0.36
Ccdc149F6V035 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.81□□□□□ -0.36
Ccdc149F6V035 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.81□□□□□ -0.36
Ccdc149F6V035 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc149F6V035 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc149F6V035 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc149F6V035 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc149F6V035 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc149F6V035 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc149F6V035 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc149F6V035 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc149F6V035 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc149F6V035 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc149F6V035 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc149F6V035 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc149F6V035 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc149F6V035 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc149F6V035 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc149F6V035 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc149F6V035 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc149F6V035 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Ccdc149F6V035 Gm11439-201ENSMUST00000118598 409 ntBASIC12.8□□□□□ -0.36
Ccdc149F6V035 Gm14832-201ENSMUST00000121289 322 ntBASIC12.8□□□□□ -0.36
Ccdc149F6V035 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.8□□□□□ -0.36
Ccdc149F6V035 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc149F6V035 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc149F6V035 Gm25700-201ENSMUST00000177693 110 ntBASIC12.8□□□□□ -0.36
Ccdc149F6V035 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc149F6V035 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.8□□□□□ -0.36
Ccdc149F6V035 Gm18753-201ENSMUST00000201000 566 ntBASIC12.8□□□□□ -0.36
Ccdc149F6V035 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.8□□□□□ -0.36
Ccdc149F6V035 Gm19208-201ENSMUST00000213861 912 ntBASIC12.8□□□□□ -0.36
Ccdc149F6V035 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.8□□□□□ -0.36
Ccdc149F6V035 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc149F6V035 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc149F6V035 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc149F6V035 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc149F6V035 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms