Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cpsf4lE9Q2N0 Gm6203-201ENSMUST00000209575 1342 ntBASIC10.67□□□□□ -0.7
Cpsf4lE9Q2N0 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Cpsf4lE9Q2N0 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cpsf4lE9Q2N0 Gm27196-201ENSMUST00000184787 2582 ntBASIC10.67□□□□□ -0.7
Cpsf4lE9Q2N0 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cpsf4lE9Q2N0 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cpsf4lE9Q2N0 Mir1247-201ENSMUST00000116706 82 ntBASIC10.67□□□□□ -0.7
Cpsf4lE9Q2N0 Gm13736-201ENSMUST00000119272 253 ntBASIC10.67□□□□□ -0.7
Cpsf4lE9Q2N0 Gm13315-201ENSMUST00000120376 991 ntBASIC10.67□□□□□ -0.7
Cpsf4lE9Q2N0 Gm11793-201ENSMUST00000120433 981 ntBASIC10.67□□□□□ -0.7
Cpsf4lE9Q2N0 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.67□□□□□ -0.7
Cpsf4lE9Q2N0 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cpsf4lE9Q2N0 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC10.67□□□□□ -0.7
Cpsf4lE9Q2N0 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Cpsf4lE9Q2N0 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cpsf4lE9Q2N0 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC10.67□□□□□ -0.7
Cpsf4lE9Q2N0 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC10.67□□□□□ -0.7
Cpsf4lE9Q2N0 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cpsf4lE9Q2N0 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Cpsf4lE9Q2N0 CU024892.2-201ENSMUST00000224608 832 ntBASIC10.67□□□□□ -0.7
Cpsf4lE9Q2N0 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cpsf4lE9Q2N0 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cpsf4lE9Q2N0 Gm10478-201ENSMUST00000084451 396 ntBASIC10.67□□□□□ -0.7
Cpsf4lE9Q2N0 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cpsf4lE9Q2N0 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Cpsf4lE9Q2N0 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cpsf4lE9Q2N0 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cpsf4lE9Q2N0 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cpsf4lE9Q2N0 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC10.67□□□□□ -0.7
Cpsf4lE9Q2N0 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cpsf4lE9Q2N0 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cpsf4lE9Q2N0 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cpsf4lE9Q2N0 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cpsf4lE9Q2N0 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 Gm3756-201ENSMUST00000169182 1355 ntBASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 Gm18227-201ENSMUST00000211082 1468 ntBASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cpsf4lE9Q2N0 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cpsf4lE9Q2N0 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cpsf4lE9Q2N0 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cpsf4lE9Q2N0 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cpsf4lE9Q2N0 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cpsf4lE9Q2N0 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cpsf4lE9Q2N0 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cpsf4lE9Q2N0 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cpsf4lE9Q2N0 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cpsf4lE9Q2N0 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cpsf4lE9Q2N0 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cpsf4lE9Q2N0 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cpsf4lE9Q2N0 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cpsf4lE9Q2N0 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Cpsf4lE9Q2N0 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Cpsf4lE9Q2N0 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cpsf4lE9Q2N0 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Cpsf4lE9Q2N0 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC10.65□□□□□ -0.7
Cpsf4lE9Q2N0 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC10.65□□□□□ -0.7
Cpsf4lE9Q2N0 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC10.65□□□□□ -0.7
Cpsf4lE9Q2N0 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cpsf4lE9Q2N0 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms