Protein–RNA interactions for Protein: E9Q0B4

Cdr1, Cerebellar degeneration-related antigen 1, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdr1E9Q0B4 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Cdr1E9Q0B4 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdr1E9Q0B4 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdr1E9Q0B4 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdr1E9Q0B4 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdr1E9Q0B4 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdr1E9Q0B4 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdr1E9Q0B4 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.4□□□□□ -0.42
Cdr1E9Q0B4 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdr1E9Q0B4 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Cdr1E9Q0B4 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.4□□□□□ -0.42
Cdr1E9Q0B4 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdr1E9Q0B4 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdr1E9Q0B4 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdr1E9Q0B4 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdr1E9Q0B4 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Cdr1E9Q0B4 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdr1E9Q0B4 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdr1E9Q0B4 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Cdr1E9Q0B4 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.4□□□□□ -0.43
Cdr1E9Q0B4 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Cdr1E9Q0B4 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Cdr1E9Q0B4 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdr1E9Q0B4 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.39□□□□□ -0.43
Cdr1E9Q0B4 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdr1E9Q0B4 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdr1E9Q0B4 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdr1E9Q0B4 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdr1E9Q0B4 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cdr1E9Q0B4 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cdr1E9Q0B4 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.39□□□□□ -0.43
Cdr1E9Q0B4 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.39□□□□□ -0.43
Cdr1E9Q0B4 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdr1E9Q0B4 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdr1E9Q0B4 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdr1E9Q0B4 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdr1E9Q0B4 Gm13365-201ENSMUST00000121188 973 ntBASIC12.39□□□□□ -0.43
Cdr1E9Q0B4 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.39□□□□□ -0.43
Cdr1E9Q0B4 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Cdr1E9Q0B4 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cdr1E9Q0B4 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdr1E9Q0B4 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.39□□□□□ -0.43
Cdr1E9Q0B4 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.39□□□□□ -0.43
Cdr1E9Q0B4 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.39□□□□□ -0.43
Cdr1E9Q0B4 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.39□□□□□ -0.43
Cdr1E9Q0B4 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdr1E9Q0B4 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Cdr1E9Q0B4 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdr1E9Q0B4 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Cdr1E9Q0B4 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdr1E9Q0B4 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cdr1E9Q0B4 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Cdr1E9Q0B4 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdr1E9Q0B4 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdr1E9Q0B4 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Cdr1E9Q0B4 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdr1E9Q0B4 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.39□□□□□ -0.43
Cdr1E9Q0B4 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdr1E9Q0B4 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdr1E9Q0B4 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cdr1E9Q0B4 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdr1E9Q0B4 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdr1E9Q0B4 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.39□□□□□ -0.43
Cdr1E9Q0B4 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdr1E9Q0B4 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.39□□□□□ -0.43
Cdr1E9Q0B4 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdr1E9Q0B4 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Cdr1E9Q0B4 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdr1E9Q0B4 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdr1E9Q0B4 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdr1E9Q0B4 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.38□□□□□ -0.43
Cdr1E9Q0B4 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdr1E9Q0B4 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdr1E9Q0B4 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdr1E9Q0B4 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdr1E9Q0B4 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdr1E9Q0B4 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdr1E9Q0B4 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Cdr1E9Q0B4 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC12.38□□□□□ -0.43
Cdr1E9Q0B4 Gm12485-201ENSMUST00000119641 291 ntBASIC12.38□□□□□ -0.43
Cdr1E9Q0B4 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.38□□□□□ -0.43
Cdr1E9Q0B4 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Cdr1E9Q0B4 Gm24158-201ENSMUST00000175263 71 ntBASIC12.38□□□□□ -0.43
Cdr1E9Q0B4 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Cdr1E9Q0B4 Mir6990-201ENSMUST00000183724 91 ntBASIC12.38□□□□□ -0.43
Cdr1E9Q0B4 Gm28630-201ENSMUST00000187806 498 ntBASIC12.38□□□□□ -0.43
Cdr1E9Q0B4 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.38□□□□□ -0.43
Cdr1E9Q0B4 Gm42599-201ENSMUST00000201308 469 ntBASIC12.38□□□□□ -0.43
Cdr1E9Q0B4 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.38□□□□□ -0.43
Cdr1E9Q0B4 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdr1E9Q0B4 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdr1E9Q0B4 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdr1E9Q0B4 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.38□□□□□ -0.43
Cdr1E9Q0B4 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdr1E9Q0B4 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdr1E9Q0B4 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdr1E9Q0B4 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdr1E9Q0B4 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdr1E9Q0B4 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdr1E9Q0B4 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms