Protein–RNA interactions for Protein: E9PUL3

Clca3b, Chloride channel accessory 3B, mousemouse

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3bE9PUL3 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clca3bE9PUL3 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clca3bE9PUL3 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Clca3bE9PUL3 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clca3bE9PUL3 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Clca3bE9PUL3 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Clca3bE9PUL3 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clca3bE9PUL3 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Clca3bE9PUL3 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clca3bE9PUL3 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Clca3bE9PUL3 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clca3bE9PUL3 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clca3bE9PUL3 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clca3bE9PUL3 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clca3bE9PUL3 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Clca3bE9PUL3 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Clca3bE9PUL3 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clca3bE9PUL3 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clca3bE9PUL3 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clca3bE9PUL3 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Clca3bE9PUL3 Gm11930-201ENSMUST00000117788 190 ntBASIC13.55□□□□□ -0.24
Clca3bE9PUL3 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.55□□□□□ -0.24
Clca3bE9PUL3 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Clca3bE9PUL3 Gm28882-201ENSMUST00000185504 314 ntBASIC13.55□□□□□ -0.24
Clca3bE9PUL3 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.55□□□□□ -0.24
Clca3bE9PUL3 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clca3bE9PUL3 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.55□□□□□ -0.24
Clca3bE9PUL3 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC13.55□□□□□ -0.24
Clca3bE9PUL3 Gm38241-201ENSMUST00000192641 898 ntBASIC13.55□□□□□ -0.24
Clca3bE9PUL3 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clca3bE9PUL3 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.55□□□□□ -0.24
Clca3bE9PUL3 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC13.55□□□□□ -0.24
Clca3bE9PUL3 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.55□□□□□ -0.24
Clca3bE9PUL3 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Clca3bE9PUL3 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Clca3bE9PUL3 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clca3bE9PUL3 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.55□□□□□ -0.24
Clca3bE9PUL3 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clca3bE9PUL3 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clca3bE9PUL3 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Clca3bE9PUL3 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Clca3bE9PUL3 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clca3bE9PUL3 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.54□□□□□ -0.24
Clca3bE9PUL3 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clca3bE9PUL3 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clca3bE9PUL3 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clca3bE9PUL3 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Clca3bE9PUL3 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clca3bE9PUL3 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clca3bE9PUL3 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Clca3bE9PUL3 Gm15547-201ENSMUST00000122152 333 ntBASIC13.54□□□□□ -0.24
Clca3bE9PUL3 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Clca3bE9PUL3 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clca3bE9PUL3 Gm27320-201ENSMUST00000184892 109 ntBASIC13.54□□□□□ -0.24
Clca3bE9PUL3 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.54□□□□□ -0.24
Clca3bE9PUL3 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.54□□□□□ -0.24
Clca3bE9PUL3 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clca3bE9PUL3 Gm24136-201ENSMUST00000083374 165 ntBASIC13.54□□□□□ -0.24
Clca3bE9PUL3 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clca3bE9PUL3 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clca3bE9PUL3 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clca3bE9PUL3 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clca3bE9PUL3 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Clca3bE9PUL3 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clca3bE9PUL3 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clca3bE9PUL3 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Clca3bE9PUL3 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Clca3bE9PUL3 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clca3bE9PUL3 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clca3bE9PUL3 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Clca3bE9PUL3 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clca3bE9PUL3 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.54□□□□□ -0.24
Clca3bE9PUL3 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clca3bE9PUL3 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clca3bE9PUL3 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clca3bE9PUL3 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Clca3bE9PUL3 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Clca3bE9PUL3 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Clca3bE9PUL3 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
Clca3bE9PUL3 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Clca3bE9PUL3 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clca3bE9PUL3 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Clca3bE9PUL3 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Clca3bE9PUL3 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Clca3bE9PUL3 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Clca3bE9PUL3 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Clca3bE9PUL3 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Clca3bE9PUL3 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.53□□□□□ -0.24
Clca3bE9PUL3 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Clca3bE9PUL3 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Clca3bE9PUL3 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clca3bE9PUL3 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clca3bE9PUL3 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clca3bE9PUL3 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.53□□□□□ -0.24
Clca3bE9PUL3 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Clca3bE9PUL3 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clca3bE9PUL3 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clca3bE9PUL3 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.53□□□□□ -0.24
Clca3bE9PUL3 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clca3bE9PUL3 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms