Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm28043E0CXC2 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm28043E0CXC2 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm28043E0CXC2 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.67□□□□□ -0.38
Gm28043E0CXC2 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm28043E0CXC2 Mir1894-201ENSMUST00000122802 81 ntBASIC12.67□□□□□ -0.38
Gm28043E0CXC2 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm28043E0CXC2 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.67□□□□□ -0.38
Gm28043E0CXC2 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm28043E0CXC2 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.67□□□□□ -0.38
Gm28043E0CXC2 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.67□□□□□ -0.38
Gm28043E0CXC2 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.67□□□□□ -0.38
Gm28043E0CXC2 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.67□□□□□ -0.38
Gm28043E0CXC2 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm28043E0CXC2 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Gm28043E0CXC2 Gm7653-201ENSMUST00000214567 508 ntBASIC12.67□□□□□ -0.38
Gm28043E0CXC2 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm28043E0CXC2 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Gm28043E0CXC2 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.67□□□□□ -0.38
Gm28043E0CXC2 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.67□□□□□ -0.38
Gm28043E0CXC2 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm28043E0CXC2 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm28043E0CXC2 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm28043E0CXC2 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm28043E0CXC2 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Gm28043E0CXC2 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm28043E0CXC2 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm28043E0CXC2 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm28043E0CXC2 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm28043E0CXC2 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm28043E0CXC2 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.67□□□□□ -0.38
Gm28043E0CXC2 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm28043E0CXC2 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm28043E0CXC2 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Gm6244-201ENSMUST00000178732 841 ntBASIC12.66□□□□□ -0.38
Gm28043E0CXC2 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Gm38671-201ENSMUST00000200573 130 ntBASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.66□□□□□ -0.38
Gm28043E0CXC2 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Gm5356-201ENSMUST00000093326 615 ntBASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.66□□□□□ -0.38
Gm28043E0CXC2 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Gm28043E0CXC2 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms