Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-2D3Z4R4 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Nkx6-2D3Z4R4 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC10.18□□□□□ -0.78
Nkx6-2D3Z4R4 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-2D3Z4R4 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-2D3Z4R4 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-2D3Z4R4 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-2D3Z4R4 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC10.18□□□□□ -0.78
Nkx6-2D3Z4R4 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC10.18□□□□□ -0.78
Nkx6-2D3Z4R4 Gm15483-201ENSMUST00000120338 456 ntBASIC10.18□□□□□ -0.78
Nkx6-2D3Z4R4 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-2D3Z4R4 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC10.18□□□□□ -0.78
Nkx6-2D3Z4R4 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Nkx6-2D3Z4R4 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Nkx6-2D3Z4R4 AC154305.4-201ENSMUST00000224520 614 ntBASIC10.18□□□□□ -0.78
Nkx6-2D3Z4R4 AC131997.1-201ENSMUST00000228611 1229 ntBASIC10.18□□□□□ -0.78
Nkx6-2D3Z4R4 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-2D3Z4R4 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-2D3Z4R4 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-2D3Z4R4 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-2D3Z4R4 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-2D3Z4R4 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-2D3Z4R4 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-2D3Z4R4 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-2D3Z4R4 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-2D3Z4R4 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.18□□□□□ -0.78
Nkx6-2D3Z4R4 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Nkx6-2D3Z4R4 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-2D3Z4R4 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.18□□□□□ -0.78
Nkx6-2D3Z4R4 AC114543.1-201ENSMUST00000226451 1558 ntBASIC10.18□□□□□ -0.78
Nkx6-2D3Z4R4 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-2D3Z4R4 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-2D3Z4R4 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Nkx6-2D3Z4R4 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-2D3Z4R4 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-2D3Z4R4 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Nkx6-2D3Z4R4 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-2D3Z4R4 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-2D3Z4R4 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-2D3Z4R4 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-2D3Z4R4 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Nkx6-2D3Z4R4 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
Nkx6-2D3Z4R4 Gm45828-201ENSMUST00000206938 1836 ntBASIC10.17□□□□□ -0.78
Nkx6-2D3Z4R4 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-2D3Z4R4 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-2D3Z4R4 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Nkx6-2D3Z4R4 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC10.17□□□□□ -0.78
Nkx6-2D3Z4R4 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-2D3Z4R4 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-2D3Z4R4 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC10.17□□□□□ -0.78
Nkx6-2D3Z4R4 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC10.17□□□□□ -0.78
Nkx6-2D3Z4R4 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC10.17□□□□□ -0.78
Nkx6-2D3Z4R4 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-2D3Z4R4 AC161829.1-201ENSMUST00000220298 281 ntBASIC10.17□□□□□ -0.78
Nkx6-2D3Z4R4 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Nkx6-2D3Z4R4 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-2D3Z4R4 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-2D3Z4R4 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-2D3Z4R4 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-2D3Z4R4 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Nkx6-2D3Z4R4 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC10.17□□□□□ -0.78
Nkx6-2D3Z4R4 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Nkx6-2D3Z4R4 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-2D3Z4R4 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-2D3Z4R4 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-2D3Z4R4 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-2D3Z4R4 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-2D3Z4R4 Gm37333-201ENSMUST00000192904 2251 ntBASIC10.17□□□□□ -0.78
Nkx6-2D3Z4R4 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx6-2D3Z4R4 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
Nkx6-2D3Z4R4 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms