Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Gm27023-201ENSMUST00000182372 285 ntBASIC12.35□□□□□ -0.43
Chd3B1AR17 Gm42937-201ENSMUST00000197360 752 ntBASIC12.35□□□□□ -0.43
Chd3B1AR17 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chd3B1AR17 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chd3B1AR17 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Chd3B1AR17 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chd3B1AR17 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chd3B1AR17 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chd3B1AR17 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chd3B1AR17 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chd3B1AR17 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.35□□□□□ -0.43
Chd3B1AR17 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chd3B1AR17 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chd3B1AR17 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.35□□□□□ -0.43
Chd3B1AR17 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.35□□□□□ -0.43
Chd3B1AR17 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chd3B1AR17 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd3B1AR17 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.34□□□□□ -0.43
Chd3B1AR17 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd3B1AR17 Gm15703-201ENSMUST00000120250 880 ntBASIC12.34□□□□□ -0.43
Chd3B1AR17 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chd3B1AR17 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.34□□□□□ -0.43
Chd3B1AR17 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chd3B1AR17 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.34□□□□□ -0.43
Chd3B1AR17 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.34□□□□□ -0.43
Chd3B1AR17 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd3B1AR17 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.34□□□□□ -0.43
Chd3B1AR17 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.34□□□□□ -0.43
Chd3B1AR17 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd3B1AR17 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd3B1AR17 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Chd3B1AR17 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd3B1AR17 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chd3B1AR17 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd3B1AR17 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd3B1AR17 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Chd3B1AR17 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.34□□□□□ -0.43
Chd3B1AR17 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chd3B1AR17 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chd3B1AR17 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd3B1AR17 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Chd3B1AR17 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd3B1AR17 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.34□□□□□ -0.43
Chd3B1AR17 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd3B1AR17 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd3B1AR17 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.34□□□□□ -0.43
Chd3B1AR17 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chd3B1AR17 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.34□□□□□ -0.43
Chd3B1AR17 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd3B1AR17 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chd3B1AR17 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd3B1AR17 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Chd3B1AR17 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chd3B1AR17 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd3B1AR17 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Chd3B1AR17 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
Chd3B1AR17 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.34□□□□□ -0.43
Chd3B1AR17 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd3B1AR17 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Chd3B1AR17 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.34□□□□□ -0.43
Chd3B1AR17 Gm44262-201ENSMUST00000204969 372 ntBASIC12.34□□□□□ -0.43
Chd3B1AR17 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chd3B1AR17 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd3B1AR17 Gm45925-201ENSMUST00000218882 744 ntBASIC12.34□□□□□ -0.43
Chd3B1AR17 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.34□□□□□ -0.43
Chd3B1AR17 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd3B1AR17 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd3B1AR17 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd3B1AR17 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd3B1AR17 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd3B1AR17 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.34□□□□□ -0.43
Chd3B1AR17 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Chd3B1AR17 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chd3B1AR17 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chd3B1AR17 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd3B1AR17 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd3B1AR17 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd3B1AR17 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd3B1AR17 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd3B1AR17 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chd3B1AR17 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Chd3B1AR17 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Chd3B1AR17 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Chd3B1AR17 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chd3B1AR17 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chd3B1AR17 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chd3B1AR17 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Chd3B1AR17 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chd3B1AR17 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chd3B1AR17 Gm14028-201ENSMUST00000117434 479 ntBASIC12.33□□□□□ -0.44
Chd3B1AR17 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC12.33□□□□□ -0.44
Chd3B1AR17 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.33□□□□□ -0.44
Chd3B1AR17 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Chd3B1AR17 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Chd3B1AR17 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Chd3B1AR17 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Chd3B1AR17 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.33□□□□□ -0.44
Chd3B1AR17 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Chd3B1AR17 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chd3B1AR17 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms