Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Gm44772-201ENSMUST00000207623 1191 ntBASIC10.13□□□□□ -0.79
Trav12d-1A0N8R0 Gm44872-201ENSMUST00000207864 420 ntBASIC10.13□□□□□ -0.79
Trav12d-1A0N8R0 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.13□□□□□ -0.79
Trav12d-1A0N8R0 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav12d-1A0N8R0 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav12d-1A0N8R0 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav12d-1A0N8R0 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav12d-1A0N8R0 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav12d-1A0N8R0 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Trav12d-1A0N8R0 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav12d-1A0N8R0 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Trav12d-1A0N8R0 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC10.13□□□□□ -0.79
Trav12d-1A0N8R0 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav12d-1A0N8R0 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Trav12d-1A0N8R0 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav12d-1A0N8R0 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.13□□□□□ -0.79
Trav12d-1A0N8R0 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav12d-1A0N8R0 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav12d-1A0N8R0 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav12d-1A0N8R0 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav12d-1A0N8R0 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav12d-1A0N8R0 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav12d-1A0N8R0 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav12d-1A0N8R0 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav12d-1A0N8R0 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav12d-1A0N8R0 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav12d-1A0N8R0 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav12d-1A0N8R0 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Gm22121-201ENSMUST00000175148 54 ntBASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Gm6652-201ENSMUST00000186414 1070 ntBASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Cdk7-205ENSMUST00000225990 1159 ntBASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav12d-1A0N8R0 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav12d-1A0N8R0 Map1b-203ENSMUST00000223725 2669 ntBASIC10.11□□□□□ -0.79
Trav12d-1A0N8R0 AC126262.1-201ENSMUST00000221802 1904 ntBASIC10.11□□□□□ -0.79
Trav12d-1A0N8R0 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav12d-1A0N8R0 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Trav12d-1A0N8R0 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav12d-1A0N8R0 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav12d-1A0N8R0 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav12d-1A0N8R0 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav12d-1A0N8R0 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav12d-1A0N8R0 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav12d-1A0N8R0 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.11□□□□□ -0.79
Trav12d-1A0N8R0 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC10.11□□□□□ -0.79
Trav12d-1A0N8R0 Gm16215-201ENSMUST00000161990 637 ntBASIC10.11□□□□□ -0.79
Trav12d-1A0N8R0 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC10.11□□□□□ -0.79
Trav12d-1A0N8R0 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms