Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC15.1■□□□□ 0.01
Cfap99A0A140LIX9 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC15.1■□□□□ 0.01
Cfap99A0A140LIX9 Gm18212-201ENSMUST00000211678 889 ntBASIC15.1■□□□□ 0.01
Cfap99A0A140LIX9 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cfap99A0A140LIX9 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cfap99A0A140LIX9 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC15.1■□□□□ 0.01
Cfap99A0A140LIX9 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cfap99A0A140LIX9 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cfap99A0A140LIX9 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cfap99A0A140LIX9 Gm42863-201ENSMUST00000197875 2958 ntBASIC15.1■□□□□ 0.01
Cfap99A0A140LIX9 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cfap99A0A140LIX9 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC15.1■□□□□ 0.01
Cfap99A0A140LIX9 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Cfap99A0A140LIX9 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cfap99A0A140LIX9 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cfap99A0A140LIX9 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC15.09■□□□□ 0.01
Cfap99A0A140LIX9 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cfap99A0A140LIX9 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cfap99A0A140LIX9 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cfap99A0A140LIX9 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cfap99A0A140LIX9 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cfap99A0A140LIX9 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cfap99A0A140LIX9 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Cfap99A0A140LIX9 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cfap99A0A140LIX9 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC15.09■□□□□ 0.01
Cfap99A0A140LIX9 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Cfap99A0A140LIX9 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cfap99A0A140LIX9 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Cfap99A0A140LIX9 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cfap99A0A140LIX9 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC15.09■□□□□ 0.01
Cfap99A0A140LIX9 Gm24990-201ENSMUST00000157406 323 ntBASIC15.09■□□□□ 0.01
Cfap99A0A140LIX9 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC15.09■□□□□ 0.01
Cfap99A0A140LIX9 Gm5869-201ENSMUST00000200248 1257 ntBASIC15.09■□□□□ 0.01
Cfap99A0A140LIX9 Gm13097-201ENSMUST00000210722 397 ntBASIC15.09■□□□□ 0.01
Cfap99A0A140LIX9 Gm32025-201ENSMUST00000217960 307 ntBASIC15.09■□□□□ 0.01
Cfap99A0A140LIX9 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cfap99A0A140LIX9 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cfap99A0A140LIX9 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cfap99A0A140LIX9 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cfap99A0A140LIX9 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Cfap99A0A140LIX9 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cfap99A0A140LIX9 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cfap99A0A140LIX9 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Cfap99A0A140LIX9 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cfap99A0A140LIX9 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cfap99A0A140LIX9 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cfap99A0A140LIX9 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cfap99A0A140LIX9 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cfap99A0A140LIX9 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cfap99A0A140LIX9 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cfap99A0A140LIX9 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cfap99A0A140LIX9 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cfap99A0A140LIX9 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC15.09■□□□□ 0.01
Cfap99A0A140LIX9 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Cfap99A0A140LIX9 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Cfap99A0A140LIX9 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Cfap99A0A140LIX9 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cfap99A0A140LIX9 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Cfap99A0A140LIX9 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC15.08■□□□□ 0
Cfap99A0A140LIX9 Gm12012-201ENSMUST00000118857 1066 ntBASIC15.08■□□□□ 0
Cfap99A0A140LIX9 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Cfap99A0A140LIX9 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cfap99A0A140LIX9 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC15.08■□□□□ 0
Cfap99A0A140LIX9 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cfap99A0A140LIX9 Gm45186-201ENSMUST00000206874 478 ntBASIC15.08■□□□□ 0
Cfap99A0A140LIX9 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC15.08■□□□□ 0
Cfap99A0A140LIX9 Gm18615-201ENSMUST00000222919 1031 ntBASIC15.08■□□□□ 0
Cfap99A0A140LIX9 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cfap99A0A140LIX9 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC15.08■□□□□ 0
Cfap99A0A140LIX9 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC15.08■□□□□ 0
Cfap99A0A140LIX9 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Cfap99A0A140LIX9 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cfap99A0A140LIX9 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cfap99A0A140LIX9 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cfap99A0A140LIX9 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cfap99A0A140LIX9 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Cfap99A0A140LIX9 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC15.08■□□□□ 0
Cfap99A0A140LIX9 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cfap99A0A140LIX9 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cfap99A0A140LIX9 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC15.08■□□□□ 0
Cfap99A0A140LIX9 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cfap99A0A140LIX9 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Cfap99A0A140LIX9 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC15.08■□□□□ 0
Cfap99A0A140LIX9 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cfap99A0A140LIX9 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cfap99A0A140LIX9 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Cfap99A0A140LIX9 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cfap99A0A140LIX9 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Cfap99A0A140LIX9 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Cfap99A0A140LIX9 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Cfap99A0A140LIX9 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Cfap99A0A140LIX9 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cfap99A0A140LIX9 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cfap99A0A140LIX9 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cfap99A0A140LIX9 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Cfap99A0A140LIX9 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Cfap99A0A140LIX9 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cfap99A0A140LIX9 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cfap99A0A140LIX9 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Cfap99A0A140LIX9 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms