Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC15.3■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC15.3■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC15.3■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atg4a-psA0A0G2JFS9 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Gm27177-202ENSMUST00000183514 2703 ntBASIC15.29■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Gm4366-201ENSMUST00000201488 1342 ntBASIC15.29■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC15.29■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Gm12058-201ENSMUST00000118614 437 ntBASIC15.29■□□□□ 0.04
Atg4a-psA0A0G2JFS9 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Gm8801-201ENSMUST00000173255 1064 ntBASIC15.29■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC15.29■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Atg4a-psA0A0G2JFS9 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Gm17420-201ENSMUST00000164753 153 ntBASIC15.28■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Mospd4-201ENSMUST00000180618 576 ntBASIC15.28■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Gm42937-201ENSMUST00000197360 752 ntBASIC15.28■□□□□ 0.04
Atg4a-psA0A0G2JFS9 AC153962.4-201ENSMUST00000217878 242 ntBASIC15.28■□□□□ 0.04
Atg4a-psA0A0G2JFS9 AC166095.1-201ENSMUST00000223731 1241 ntBASIC15.28■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Gm10478-201ENSMUST00000084451 396 ntBASIC15.28■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Atg4a-psA0A0G2JFS9 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Atg4a-psA0A0G2JFS9 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC15.28■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Gm42480-201ENSMUST00000198434 2595 ntBASIC15.28■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.04
Atg4a-psA0A0G2JFS9 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Trav4d-2-201ENSMUST00000120914 335 ntBASIC15.27■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC15.27■□□□□ 0.04
Atg4a-psA0A0G2JFS9 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Gm8227-201ENSMUST00000223306 571 ntBASIC15.27■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Atg4a-psA0A0G2JFS9 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Atg4a-psA0A0G2JFS9 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Atg4a-psA0A0G2JFS9 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Atg4a-psA0A0G2JFS9 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Atg4a-psA0A0G2JFS9 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Atg4a-psA0A0G2JFS9 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Atg4a-psA0A0G2JFS9 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Atg4a-psA0A0G2JFS9 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Atg4a-psA0A0G2JFS9 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Atg4a-psA0A0G2JFS9 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC15.26■□□□□ 0.03
Atg4a-psA0A0G2JFS9 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC15.26■□□□□ 0.03
Atg4a-psA0A0G2JFS9 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Atg4a-psA0A0G2JFS9 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Atg4a-psA0A0G2JFS9 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Atg4a-psA0A0G2JFS9 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Atg4a-psA0A0G2JFS9 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Atg4a-psA0A0G2JFS9 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC15.26■□□□□ 0.03
Atg4a-psA0A0G2JFS9 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Atg4a-psA0A0G2JFS9 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms