Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.34□□□□□ -0.75
Trav18A0A075B656 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.75
Trav18A0A075B656 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav18A0A075B656 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav18A0A075B656 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav18A0A075B656 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav18A0A075B656 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav18A0A075B656 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav18A0A075B656 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav18A0A075B656 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Trav18A0A075B656 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.33□□□□□ -0.76
Trav18A0A075B656 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav18A0A075B656 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav18A0A075B656 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav18A0A075B656 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav18A0A075B656 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav18A0A075B656 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav18A0A075B656 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav18A0A075B656 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav18A0A075B656 Gm11803-201ENSMUST00000119966 444 ntBASIC10.33□□□□□ -0.76
Trav18A0A075B656 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC10.33□□□□□ -0.76
Trav18A0A075B656 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Trav18A0A075B656 Gm23363-201ENSMUST00000175024 79 ntBASIC10.33□□□□□ -0.76
Trav18A0A075B656 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav18A0A075B656 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav18A0A075B656 Gm5896-201ENSMUST00000189662 1024 ntBASIC10.33□□□□□ -0.76
Trav18A0A075B656 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav18A0A075B656 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav18A0A075B656 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC10.33□□□□□ -0.76
Trav18A0A075B656 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC10.33□□□□□ -0.76
Trav18A0A075B656 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav18A0A075B656 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav18A0A075B656 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav18A0A075B656 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Trav18A0A075B656 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Trav18A0A075B656 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Trav18A0A075B656 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Trav18A0A075B656 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav18A0A075B656 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav18A0A075B656 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Trav18A0A075B656 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
Trav18A0A075B656 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav18A0A075B656 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav18A0A075B656 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.33□□□□□ -0.76
Trav18A0A075B656 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Trav18A0A075B656 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav18A0A075B656 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav18A0A075B656 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav18A0A075B656 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav18A0A075B656 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav18A0A075B656 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
Trav18A0A075B656 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav18A0A075B656 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav18A0A075B656 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav18A0A075B656 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav18A0A075B656 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav18A0A075B656 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.32□□□□□ -0.76
Trav18A0A075B656 Gm38157-201ENSMUST00000194178 1698 ntBASIC10.32□□□□□ -0.76
Trav18A0A075B656 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav18A0A075B656 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Trav18A0A075B656 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav18A0A075B656 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Trav18A0A075B656 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Trav18A0A075B656 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Trav18A0A075B656 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav18A0A075B656 Gm8213-201ENSMUST00000118191 441 ntBASIC10.32□□□□□ -0.76
Trav18A0A075B656 Gm14921-201ENSMUST00000118643 908 ntBASIC10.32□□□□□ -0.76
Trav18A0A075B656 Gm13369-201ENSMUST00000119442 987 ntBASIC10.32□□□□□ -0.76
Trav18A0A075B656 Gm13394-201ENSMUST00000121658 1000 ntBASIC10.32□□□□□ -0.76
Trav18A0A075B656 Gm10156-201ENSMUST00000122364 462 ntBASIC10.32□□□□□ -0.76
Trav18A0A075B656 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav18A0A075B656 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC10.32□□□□□ -0.76
Trav18A0A075B656 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav18A0A075B656 Gm26185-201ENSMUST00000157692 266 ntBASIC10.32□□□□□ -0.76
Trav18A0A075B656 Gm17208-201ENSMUST00000168388 535 ntBASIC10.32□□□□□ -0.76
Trav18A0A075B656 Gm8515-201ENSMUST00000194852 576 ntBASIC10.32□□□□□ -0.76
Trav18A0A075B656 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC10.32□□□□□ -0.76
Trav18A0A075B656 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Trav18A0A075B656 Gm45384-201ENSMUST00000210451 277 ntBASIC10.32□□□□□ -0.76
Trav18A0A075B656 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav18A0A075B656 Cdk7-205ENSMUST00000225990 1159 ntBASIC10.32□□□□□ -0.76
Trav18A0A075B656 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav18A0A075B656 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav18A0A075B656 Gm6180-201ENSMUST00000065243 498 ntBASIC10.32□□□□□ -0.76
Trav18A0A075B656 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Trav18A0A075B656 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav18A0A075B656 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav18A0A075B656 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav18A0A075B656 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav18A0A075B656 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav18A0A075B656 Cog3-203ENSMUST00000227473 4197 ntBASIC10.32□□□□□ -0.76
Trav18A0A075B656 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav18A0A075B656 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav18A0A075B656 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav18A0A075B656 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC10.32□□□□□ -0.76
Trav18A0A075B656 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav18A0A075B656 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Trav18A0A075B656 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav18A0A075B656 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav18A0A075B656 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms