Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 Gm18304-201ENSMUST00000189162 546 ntBASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 Rprl1-202ENSMUST00000198476 238 ntBASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 AC113441.2-201ENSMUST00000221538 1468 ntBASIC13.1□□□□□ -0.31
Smarcb1Q9Z0H3 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcb1Q9Z0H3 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcb1Q9Z0H3 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Smarcb1Q9Z0H3 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.1□□□□□ -0.31
Smarcb1Q9Z0H3 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcb1Q9Z0H3 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Smarcb1Q9Z0H3 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcb1Q9Z0H3 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcb1Q9Z0H3 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcb1Q9Z0H3 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcb1Q9Z0H3 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcb1Q9Z0H3 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcb1Q9Z0H3 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Smarcb1Q9Z0H3 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.1□□□□□ -0.31
Smarcb1Q9Z0H3 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Smarcb1Q9Z0H3 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.1□□□□□ -0.31
Smarcb1Q9Z0H3 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcb1Q9Z0H3 Gm37466-201ENSMUST00000195692 652 ntBASIC13.1□□□□□ -0.31
Smarcb1Q9Z0H3 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.1□□□□□ -0.31
Smarcb1Q9Z0H3 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Smarcb1Q9Z0H3 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Smarcb1Q9Z0H3 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcb1Q9Z0H3 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Smarcb1Q9Z0H3 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcb1Q9Z0H3 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcb1Q9Z0H3 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcb1Q9Z0H3 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Smarcb1Q9Z0H3 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Smarcb1Q9Z0H3 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcb1Q9Z0H3 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcb1Q9Z0H3 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcb1Q9Z0H3 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcb1Q9Z0H3 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcb1Q9Z0H3 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.1□□□□□ -0.31
Smarcb1Q9Z0H3 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Smarcb1Q9Z0H3 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcb1Q9Z0H3 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Smarcb1Q9Z0H3 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.09□□□□□ -0.31
Smarcb1Q9Z0H3 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Smarcb1Q9Z0H3 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Smarcb1Q9Z0H3 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.09□□□□□ -0.31
Smarcb1Q9Z0H3 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcb1Q9Z0H3 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcb1Q9Z0H3 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Smarcb1Q9Z0H3 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Smarcb1Q9Z0H3 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC13.09□□□□□ -0.31
Smarcb1Q9Z0H3 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcb1Q9Z0H3 Gm12997-201ENSMUST00000120207 640 ntBASIC13.09□□□□□ -0.31
Smarcb1Q9Z0H3 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcb1Q9Z0H3 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.09□□□□□ -0.31
Smarcb1Q9Z0H3 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcb1Q9Z0H3 Gm45186-201ENSMUST00000206874 478 ntBASIC13.09□□□□□ -0.31
Smarcb1Q9Z0H3 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.09□□□□□ -0.31
Smarcb1Q9Z0H3 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.09□□□□□ -0.31
Smarcb1Q9Z0H3 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcb1Q9Z0H3 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcb1Q9Z0H3 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcb1Q9Z0H3 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcb1Q9Z0H3 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcb1Q9Z0H3 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcb1Q9Z0H3 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.09□□□□□ -0.31
Smarcb1Q9Z0H3 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcb1Q9Z0H3 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcb1Q9Z0H3 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcb1Q9Z0H3 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcb1Q9Z0H3 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.09□□□□□ -0.31
Smarcb1Q9Z0H3 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.09□□□□□ -0.31
Smarcb1Q9Z0H3 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcb1Q9Z0H3 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms