Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubd1Q9R1K7 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.8□□□□□ -0.36
Tubd1Q9R1K7 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tubd1Q9R1K7 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.8□□□□□ -0.36
Tubd1Q9R1K7 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.8□□□□□ -0.36
Tubd1Q9R1K7 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubd1Q9R1K7 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubd1Q9R1K7 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tubd1Q9R1K7 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tubd1Q9R1K7 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Tubd1Q9R1K7 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tubd1Q9R1K7 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.79□□□□□ -0.36
Tubd1Q9R1K7 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubd1Q9R1K7 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubd1Q9R1K7 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Tubd1Q9R1K7 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Tubd1Q9R1K7 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tubd1Q9R1K7 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubd1Q9R1K7 Gm25214-201ENSMUST00000104573 129 ntBASIC12.79□□□□□ -0.36
Tubd1Q9R1K7 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
Tubd1Q9R1K7 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tubd1Q9R1K7 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.79□□□□□ -0.36
Tubd1Q9R1K7 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.79□□□□□ -0.36
Tubd1Q9R1K7 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.79□□□□□ -0.36
Tubd1Q9R1K7 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubd1Q9R1K7 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Tubd1Q9R1K7 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tubd1Q9R1K7 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Tubd1Q9R1K7 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubd1Q9R1K7 Gm43630-201ENSMUST00000201550 776 ntBASIC12.79□□□□□ -0.36
Tubd1Q9R1K7 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.79□□□□□ -0.36
Tubd1Q9R1K7 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubd1Q9R1K7 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tubd1Q9R1K7 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubd1Q9R1K7 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubd1Q9R1K7 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubd1Q9R1K7 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubd1Q9R1K7 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubd1Q9R1K7 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubd1Q9R1K7 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubd1Q9R1K7 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubd1Q9R1K7 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Tubd1Q9R1K7 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubd1Q9R1K7 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
Tubd1Q9R1K7 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubd1Q9R1K7 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubd1Q9R1K7 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Tubd1Q9R1K7 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Gm7399-201ENSMUST00000032395 858 ntBASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.78□□□□□ -0.36
Tubd1Q9R1K7 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms