Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf40aQ9R1C7 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf40aQ9R1C7 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf40aQ9R1C7 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.93□□□□□ -0.18
Prpf40aQ9R1C7 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Prpf40aQ9R1C7 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf40aQ9R1C7 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Prpf40aQ9R1C7 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Prpf40aQ9R1C7 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf40aQ9R1C7 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf40aQ9R1C7 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.92□□□□□ -0.18
Prpf40aQ9R1C7 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf40aQ9R1C7 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.92□□□□□ -0.18
Prpf40aQ9R1C7 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf40aQ9R1C7 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.92□□□□□ -0.18
Prpf40aQ9R1C7 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.92□□□□□ -0.18
Prpf40aQ9R1C7 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf40aQ9R1C7 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Prpf40aQ9R1C7 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.92□□□□□ -0.18
Prpf40aQ9R1C7 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf40aQ9R1C7 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC13.92□□□□□ -0.18
Prpf40aQ9R1C7 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf40aQ9R1C7 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf40aQ9R1C7 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Prpf40aQ9R1C7 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf40aQ9R1C7 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Prpf40aQ9R1C7 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf40aQ9R1C7 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.92□□□□□ -0.18
Prpf40aQ9R1C7 Gm22121-201ENSMUST00000175148 54 ntBASIC13.92□□□□□ -0.18
Prpf40aQ9R1C7 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.92□□□□□ -0.18
Prpf40aQ9R1C7 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.92□□□□□ -0.18
Prpf40aQ9R1C7 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.92□□□□□ -0.18
Prpf40aQ9R1C7 CT009764.1-201ENSMUST00000222260 483 ntBASIC13.92□□□□□ -0.18
Prpf40aQ9R1C7 Gm25857-201ENSMUST00000082788 129 ntBASIC13.92□□□□□ -0.18
Prpf40aQ9R1C7 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf40aQ9R1C7 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf40aQ9R1C7 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
Prpf40aQ9R1C7 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf40aQ9R1C7 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Prpf40aQ9R1C7 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf40aQ9R1C7 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.92□□□□□ -0.18
Prpf40aQ9R1C7 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf40aQ9R1C7 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf40aQ9R1C7 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf40aQ9R1C7 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf40aQ9R1C7 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf40aQ9R1C7 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.91□□□□□ -0.18
Prpf40aQ9R1C7 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.91□□□□□ -0.18
Prpf40aQ9R1C7 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf40aQ9R1C7 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf40aQ9R1C7 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf40aQ9R1C7 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf40aQ9R1C7 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf40aQ9R1C7 Gm14921-201ENSMUST00000118643 908 ntBASIC13.91□□□□□ -0.18
Prpf40aQ9R1C7 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Prpf40aQ9R1C7 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.91□□□□□ -0.18
Prpf40aQ9R1C7 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.91□□□□□ -0.18
Prpf40aQ9R1C7 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.91□□□□□ -0.18
Prpf40aQ9R1C7 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf40aQ9R1C7 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.91□□□□□ -0.18
Prpf40aQ9R1C7 Snora78-201ENSMUST00000158630 128 ntBASIC13.91□□□□□ -0.18
Prpf40aQ9R1C7 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC13.91□□□□□ -0.18
Prpf40aQ9R1C7 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.91□□□□□ -0.18
Prpf40aQ9R1C7 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.91□□□□□ -0.18
Prpf40aQ9R1C7 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.91□□□□□ -0.18
Prpf40aQ9R1C7 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.91□□□□□ -0.18
Prpf40aQ9R1C7 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf40aQ9R1C7 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.91□□□□□ -0.18
Prpf40aQ9R1C7 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf40aQ9R1C7 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf40aQ9R1C7 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Prpf40aQ9R1C7 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.91□□□□□ -0.18
Prpf40aQ9R1C7 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf40aQ9R1C7 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.91□□□□□ -0.18
Prpf40aQ9R1C7 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf40aQ9R1C7 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf40aQ9R1C7 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.91□□□□□ -0.18
Prpf40aQ9R1C7 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf40aQ9R1C7 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Prpf40aQ9R1C7 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf40aQ9R1C7 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf40aQ9R1C7 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf40aQ9R1C7 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.91□□□□□ -0.18
Prpf40aQ9R1C7 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Prpf40aQ9R1C7 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf40aQ9R1C7 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.9□□□□□ -0.18
Prpf40aQ9R1C7 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf40aQ9R1C7 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf40aQ9R1C7 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Prpf40aQ9R1C7 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Prpf40aQ9R1C7 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf40aQ9R1C7 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.9□□□□□ -0.18
Prpf40aQ9R1C7 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Prpf40aQ9R1C7 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Prpf40aQ9R1C7 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf40aQ9R1C7 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.9□□□□□ -0.18
Prpf40aQ9R1C7 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.9□□□□□ -0.18
Prpf40aQ9R1C7 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf40aQ9R1C7 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.9□□□□□ -0.18
Prpf40aQ9R1C7 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms