Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Nubp2Q9R061 Matn2-203ENSMUST00000226766 3252 ntBASIC11.26□□□□□ -0.61
Nubp2Q9R061 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nubp2Q9R061 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nubp2Q9R061 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nubp2Q9R061 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nubp2Q9R061 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.26□□□□□ -0.61
Nubp2Q9R061 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.26□□□□□ -0.61
Nubp2Q9R061 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nubp2Q9R061 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nubp2Q9R061 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nubp2Q9R061 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nubp2Q9R061 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nubp2Q9R061 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.26□□□□□ -0.61
Nubp2Q9R061 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nubp2Q9R061 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Gm8062-201ENSMUST00000139696 444 ntBASIC11.25□□□□□ -0.61
Nubp2Q9R061 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.25□□□□□ -0.61
Nubp2Q9R061 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
Nubp2Q9R061 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nubp2Q9R061 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.25□□□□□ -0.61
Nubp2Q9R061 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.25□□□□□ -0.61
Nubp2Q9R061 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.25□□□□□ -0.61
Nubp2Q9R061 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nubp2Q9R061 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.24□□□□□ -0.61
Nubp2Q9R061 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nubp2Q9R061 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Nubp2Q9R061 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.24□□□□□ -0.61
Nubp2Q9R061 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nubp2Q9R061 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Nubp2Q9R061 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nubp2Q9R061 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nubp2Q9R061 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nubp2Q9R061 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nubp2Q9R061 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nubp2Q9R061 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Nubp2Q9R061 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nubp2Q9R061 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nubp2Q9R061 Gm16202-201ENSMUST00000117532 544 ntBASIC11.24□□□□□ -0.61
Nubp2Q9R061 Gm6447-201ENSMUST00000118905 835 ntBASIC11.24□□□□□ -0.61
Nubp2Q9R061 Gm13369-201ENSMUST00000119442 987 ntBASIC11.24□□□□□ -0.61
Nubp2Q9R061 Gm1335-201ENSMUST00000121653 386 ntBASIC11.24□□□□□ -0.61
Nubp2Q9R061 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nubp2Q9R061 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Nubp2Q9R061 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.24□□□□□ -0.61
Nubp2Q9R061 Gm5370-201ENSMUST00000187187 574 ntBASIC11.24□□□□□ -0.61
Nubp2Q9R061 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.24□□□□□ -0.61
Nubp2Q9R061 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.24□□□□□ -0.61
Nubp2Q9R061 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.24□□□□□ -0.61
Nubp2Q9R061 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.24□□□□□ -0.61
Nubp2Q9R061 Gm44069-201ENSMUST00000204898 506 ntBASIC11.24□□□□□ -0.61
Nubp2Q9R061 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nubp2Q9R061 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nubp2Q9R061 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nubp2Q9R061 Gm10478-201ENSMUST00000084451 396 ntBASIC11.24□□□□□ -0.61
Nubp2Q9R061 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.24□□□□□ -0.61
Nubp2Q9R061 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.24□□□□□ -0.61
Nubp2Q9R061 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms