Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a4Q9QZR9 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a4Q9QZR9 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a4Q9QZR9 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a4Q9QZR9 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a4Q9QZR9 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a4Q9QZR9 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a4Q9QZR9 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a4Q9QZR9 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Col4a4Q9QZR9 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Col4a4Q9QZR9 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a4Q9QZR9 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a4Q9QZR9 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a4Q9QZR9 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a4Q9QZR9 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a4Q9QZR9 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC12.32□□□□□ -0.44
Col4a4Q9QZR9 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12.32□□□□□ -0.44
Col4a4Q9QZR9 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12.32□□□□□ -0.44
Col4a4Q9QZR9 Gm26134-201ENSMUST00000178484 110 ntBASIC12.32□□□□□ -0.44
Col4a4Q9QZR9 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Col4a4Q9QZR9 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Col4a4Q9QZR9 Gm6855-201ENSMUST00000206307 790 ntBASIC12.32□□□□□ -0.44
Col4a4Q9QZR9 Gm6390-201ENSMUST00000215034 589 ntBASIC12.32□□□□□ -0.44
Col4a4Q9QZR9 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC12.32□□□□□ -0.44
Col4a4Q9QZR9 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC12.32□□□□□ -0.44
Col4a4Q9QZR9 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC12.32□□□□□ -0.44
Col4a4Q9QZR9 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a4Q9QZR9 Gm26035-201ENSMUST00000083065 308 ntBASIC12.32□□□□□ -0.44
Col4a4Q9QZR9 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Col4a4Q9QZR9 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a4Q9QZR9 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a4Q9QZR9 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.32□□□□□ -0.44
Col4a4Q9QZR9 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Col4a4Q9QZR9 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a4Q9QZR9 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Gm18294-201ENSMUST00000176980 1748 ntBASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Gm13117-201ENSMUST00000120894 691 ntBASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Gm11660-201ENSMUST00000120955 412 ntBASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Gm25998-201ENSMUST00000175397 53 ntBASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 CT030652.1-201ENSMUST00000227377 1235 ntBASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Gm43334-201ENSMUST00000197740 1318 ntBASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.31□□□□□ -0.44
Col4a4Q9QZR9 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a4Q9QZR9 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Col4a4Q9QZR9 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a4Q9QZR9 Gm4900-201ENSMUST00000222046 1628 ntBASIC12.3□□□□□ -0.44
Col4a4Q9QZR9 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a4Q9QZR9 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a4Q9QZR9 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a4Q9QZR9 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a4Q9QZR9 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a4Q9QZR9 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a4Q9QZR9 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a4Q9QZR9 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms