Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lima1Q9ERG0 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.47□□□□□ -0.41
Lima1Q9ERG0 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.47□□□□□ -0.41
Lima1Q9ERG0 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.47□□□□□ -0.41
Lima1Q9ERG0 Itm2b-204ENSMUST00000228637 783 ntBASIC12.47□□□□□ -0.41
Lima1Q9ERG0 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lima1Q9ERG0 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lima1Q9ERG0 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lima1Q9ERG0 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Lima1Q9ERG0 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.47□□□□□ -0.41
Lima1Q9ERG0 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lima1Q9ERG0 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lima1Q9ERG0 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lima1Q9ERG0 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lima1Q9ERG0 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lima1Q9ERG0 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Lima1Q9ERG0 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lima1Q9ERG0 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lima1Q9ERG0 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lima1Q9ERG0 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.47□□□□□ -0.41
Lima1Q9ERG0 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lima1Q9ERG0 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.47□□□□□ -0.41
Lima1Q9ERG0 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lima1Q9ERG0 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.46□□□□□ -0.41
Lima1Q9ERG0 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lima1Q9ERG0 Map1b-203ENSMUST00000223725 2669 ntBASIC12.46□□□□□ -0.41
Lima1Q9ERG0 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lima1Q9ERG0 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lima1Q9ERG0 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lima1Q9ERG0 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.46□□□□□ -0.41
Lima1Q9ERG0 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.46□□□□□ -0.41
Lima1Q9ERG0 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Lima1Q9ERG0 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
Lima1Q9ERG0 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lima1Q9ERG0 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lima1Q9ERG0 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lima1Q9ERG0 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Lima1Q9ERG0 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lima1Q9ERG0 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lima1Q9ERG0 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lima1Q9ERG0 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lima1Q9ERG0 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lima1Q9ERG0 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.46□□□□□ -0.41
Lima1Q9ERG0 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.46□□□□□ -0.41
Lima1Q9ERG0 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.46□□□□□ -0.41
Lima1Q9ERG0 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.46□□□□□ -0.41
Lima1Q9ERG0 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.46□□□□□ -0.41
Lima1Q9ERG0 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.46□□□□□ -0.41
Lima1Q9ERG0 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lima1Q9ERG0 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lima1Q9ERG0 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.46□□□□□ -0.41
Lima1Q9ERG0 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lima1Q9ERG0 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.46□□□□□ -0.41
Lima1Q9ERG0 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Lima1Q9ERG0 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.46□□□□□ -0.41
Lima1Q9ERG0 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Lima1Q9ERG0 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lima1Q9ERG0 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lima1Q9ERG0 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lima1Q9ERG0 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lima1Q9ERG0 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Lima1Q9ERG0 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lima1Q9ERG0 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lima1Q9ERG0 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Lima1Q9ERG0 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.46□□□□□ -0.42
Lima1Q9ERG0 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Lima1Q9ERG0 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Lima1Q9ERG0 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lima1Q9ERG0 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.45□□□□□ -0.42
Lima1Q9ERG0 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lima1Q9ERG0 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lima1Q9ERG0 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lima1Q9ERG0 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lima1Q9ERG0 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lima1Q9ERG0 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lima1Q9ERG0 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lima1Q9ERG0 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lima1Q9ERG0 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lima1Q9ERG0 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Lima1Q9ERG0 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lima1Q9ERG0 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lima1Q9ERG0 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lima1Q9ERG0 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.45□□□□□ -0.42
Lima1Q9ERG0 Gm14928-201ENSMUST00000120198 477 ntBASIC12.45□□□□□ -0.42
Lima1Q9ERG0 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.45□□□□□ -0.42
Lima1Q9ERG0 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Lima1Q9ERG0 Gm28911-201ENSMUST00000188837 117 ntBASIC12.45□□□□□ -0.42
Lima1Q9ERG0 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lima1Q9ERG0 Gm8463-201ENSMUST00000208573 613 ntBASIC12.45□□□□□ -0.42
Lima1Q9ERG0 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.45□□□□□ -0.42
Lima1Q9ERG0 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lima1Q9ERG0 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.45□□□□□ -0.42
Lima1Q9ERG0 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.45□□□□□ -0.42
Lima1Q9ERG0 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lima1Q9ERG0 Gm6180-201ENSMUST00000065243 498 ntBASIC12.45□□□□□ -0.42
Lima1Q9ERG0 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Lima1Q9ERG0 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lima1Q9ERG0 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Lima1Q9ERG0 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lima1Q9ERG0 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms