Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hmg20aQ9DC33 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.53□□□□□ -0.56
Hmg20aQ9DC33 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hmg20aQ9DC33 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hmg20aQ9DC33 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Hmg20aQ9DC33 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hmg20aQ9DC33 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hmg20aQ9DC33 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.53□□□□□ -0.56
Hmg20aQ9DC33 BC043934-202ENSMUST00000185694 2356 ntBASIC11.53□□□□□ -0.56
Hmg20aQ9DC33 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hmg20aQ9DC33 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hmg20aQ9DC33 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Hmg20aQ9DC33 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Hmg20aQ9DC33 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hmg20aQ9DC33 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Hmg20aQ9DC33 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hmg20aQ9DC33 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hmg20aQ9DC33 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hmg20aQ9DC33 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hmg20aQ9DC33 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Hmg20aQ9DC33 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Hmg20aQ9DC33 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Hmg20aQ9DC33 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hmg20aQ9DC33 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hmg20aQ9DC33 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hmg20aQ9DC33 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hmg20aQ9DC33 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hmg20aQ9DC33 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.56
Hmg20aQ9DC33 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Hmg20aQ9DC33 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Hmg20aQ9DC33 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hmg20aQ9DC33 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.52□□□□□ -0.57
Hmg20aQ9DC33 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hmg20aQ9DC33 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hmg20aQ9DC33 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.52□□□□□ -0.57
Hmg20aQ9DC33 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.52□□□□□ -0.57
Hmg20aQ9DC33 Mir1897-201ENSMUST00000122581 272 ntBASIC11.52□□□□□ -0.57
Hmg20aQ9DC33 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC11.52□□□□□ -0.57
Hmg20aQ9DC33 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.52□□□□□ -0.57
Hmg20aQ9DC33 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.52□□□□□ -0.57
Hmg20aQ9DC33 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC11.52□□□□□ -0.57
Hmg20aQ9DC33 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hmg20aQ9DC33 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hmg20aQ9DC33 CT943659.1-201ENSMUST00000215459 326 ntBASIC11.52□□□□□ -0.57
Hmg20aQ9DC33 AC154621.1-201ENSMUST00000226155 1119 ntBASIC11.52□□□□□ -0.57
Hmg20aQ9DC33 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Hmg20aQ9DC33 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Hmg20aQ9DC33 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hmg20aQ9DC33 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hmg20aQ9DC33 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hmg20aQ9DC33 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hmg20aQ9DC33 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.52□□□□□ -0.57
Hmg20aQ9DC33 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.52□□□□□ -0.57
Hmg20aQ9DC33 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hmg20aQ9DC33 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hmg20aQ9DC33 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hmg20aQ9DC33 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.52□□□□□ -0.57
Hmg20aQ9DC33 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hmg20aQ9DC33 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.52□□□□□ -0.57
Hmg20aQ9DC33 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hmg20aQ9DC33 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hmg20aQ9DC33 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.52□□□□□ -0.57
Hmg20aQ9DC33 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hmg20aQ9DC33 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hmg20aQ9DC33 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hmg20aQ9DC33 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hmg20aQ9DC33 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hmg20aQ9DC33 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hmg20aQ9DC33 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hmg20aQ9DC33 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.51□□□□□ -0.57
Hmg20aQ9DC33 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hmg20aQ9DC33 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.51□□□□□ -0.57
Hmg20aQ9DC33 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Hmg20aQ9DC33 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hmg20aQ9DC33 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hmg20aQ9DC33 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.51□□□□□ -0.57
Hmg20aQ9DC33 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Hmg20aQ9DC33 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hmg20aQ9DC33 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.51□□□□□ -0.57
Hmg20aQ9DC33 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hmg20aQ9DC33 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC11.51□□□□□ -0.57
Hmg20aQ9DC33 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Hmg20aQ9DC33 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.51□□□□□ -0.57
Hmg20aQ9DC33 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.51□□□□□ -0.57
Hmg20aQ9DC33 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Hmg20aQ9DC33 Gm33320-201ENSMUST00000192232 530 ntBASIC11.51□□□□□ -0.57
Hmg20aQ9DC33 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.51□□□□□ -0.57
Hmg20aQ9DC33 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Hmg20aQ9DC33 AC126408.1-201ENSMUST00000225184 523 ntBASIC11.51□□□□□ -0.57
Hmg20aQ9DC33 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.51□□□□□ -0.57
Hmg20aQ9DC33 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hmg20aQ9DC33 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hmg20aQ9DC33 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hmg20aQ9DC33 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Hmg20aQ9DC33 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hmg20aQ9DC33 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hmg20aQ9DC33 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hmg20aQ9DC33 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hmg20aQ9DC33 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hmg20aQ9DC33 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms