Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Gm28695-201ENSMUST00000190300 697 ntBASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Gm37448-201ENSMUST00000192795 697 ntBASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Gm44100-201ENSMUST00000204329 436 ntBASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Gm45598-202ENSMUST00000210719 986 ntBASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Mir1943-201ENSMUST00000158276 73 ntBASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Gm27552-201ENSMUST00000183351 62 ntBASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Gm27844-201ENSMUST00000183613 62 ntBASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Gm27627-201ENSMUST00000183644 150 ntBASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.37□□□□□ -0.43
Rrp8Q9DB85 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp8Q9DB85 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp8Q9DB85 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp8Q9DB85 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp8Q9DB85 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp8Q9DB85 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp8Q9DB85 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp8Q9DB85 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Rrp8Q9DB85 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp8Q9DB85 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp8Q9DB85 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp8Q9DB85 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp8Q9DB85 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp8Q9DB85 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp8Q9DB85 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.36□□□□□ -0.43
Rrp8Q9DB85 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp8Q9DB85 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Rrp8Q9DB85 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp8Q9DB85 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.36□□□□□ -0.43
Rrp8Q9DB85 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.36□□□□□ -0.43
Rrp8Q9DB85 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.36□□□□□ -0.43
Rrp8Q9DB85 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.36□□□□□ -0.43
Rrp8Q9DB85 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.36□□□□□ -0.43
Rrp8Q9DB85 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Rrp8Q9DB85 Gm19187-201ENSMUST00000206781 892 ntBASIC12.36□□□□□ -0.43
Rrp8Q9DB85 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp8Q9DB85 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp8Q9DB85 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp8Q9DB85 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp8Q9DB85 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms