Protein–RNA interactions for Protein: Q9D968

Hcfc2, Host cell factor 2, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc2Q9D968 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Gm5053-201ENSMUST00000208361 1678 ntBASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Gm14701-201ENSMUST00000117156 348 ntBASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Gm26464-201ENSMUST00000157094 305 ntBASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Gm9063-201ENSMUST00000223299 582 ntBASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Gm15222-202ENSMUST00000228667 1726 ntBASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hcfc2Q9D968 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.88
Hcfc2Q9D968 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hcfc2Q9D968 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hcfc2Q9D968 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hcfc2Q9D968 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hcfc2Q9D968 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hcfc2Q9D968 Gm37513-201ENSMUST00000194830 2268 ntBASIC9.58□□□□□ -0.88
Hcfc2Q9D968 Gm38378-201ENSMUST00000195153 2268 ntBASIC9.58□□□□□ -0.88
Hcfc2Q9D968 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hcfc2Q9D968 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hcfc2Q9D968 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hcfc2Q9D968 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC9.58□□□□□ -0.88
Hcfc2Q9D968 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hcfc2Q9D968 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hcfc2Q9D968 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hcfc2Q9D968 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hcfc2Q9D968 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC9.58□□□□□ -0.88
Hcfc2Q9D968 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC9.58□□□□□ -0.88
Hcfc2Q9D968 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hcfc2Q9D968 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC9.58□□□□□ -0.88
Hcfc2Q9D968 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC9.58□□□□□ -0.88
Hcfc2Q9D968 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hcfc2Q9D968 Gm11400-201ENSMUST00000120853 1214 ntBASIC9.58□□□□□ -0.88
Hcfc2Q9D968 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hcfc2Q9D968 Gm26308-201ENSMUST00000157768 69 ntBASIC9.58□□□□□ -0.88
Hcfc2Q9D968 Gm6736-201ENSMUST00000166583 948 ntBASIC9.58□□□□□ -0.88
Hcfc2Q9D968 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms