Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC16.59■□□□□ 0.25
U2af1Q9D883 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
U2af1Q9D883 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
U2af1Q9D883 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
U2af1Q9D883 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
U2af1Q9D883 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
U2af1Q9D883 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
U2af1Q9D883 Gm2673-201ENSMUST00000120958 1608 ntBASIC16.59■□□□□ 0.25
U2af1Q9D883 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
U2af1Q9D883 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
U2af1Q9D883 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
U2af1Q9D883 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
U2af1Q9D883 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
U2af1Q9D883 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
U2af1Q9D883 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
U2af1Q9D883 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
U2af1Q9D883 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
U2af1Q9D883 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
U2af1Q9D883 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
U2af1Q9D883 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC16.58■□□□□ 0.24
U2af1Q9D883 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
U2af1Q9D883 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
U2af1Q9D883 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
U2af1Q9D883 Gm17376-201ENSMUST00000166016 84 ntBASIC16.58■□□□□ 0.24
U2af1Q9D883 Gm20482-202ENSMUST00000174729 825 ntBASIC16.58■□□□□ 0.24
U2af1Q9D883 Gm27023-201ENSMUST00000182372 285 ntBASIC16.58■□□□□ 0.24
U2af1Q9D883 Gm27243-201ENSMUST00000183964 521 ntBASIC16.58■□□□□ 0.24
U2af1Q9D883 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC16.58■□□□□ 0.24
U2af1Q9D883 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
U2af1Q9D883 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC16.58■□□□□ 0.24
U2af1Q9D883 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
U2af1Q9D883 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
U2af1Q9D883 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
U2af1Q9D883 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC16.58■□□□□ 0.24
U2af1Q9D883 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
U2af1Q9D883 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
U2af1Q9D883 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
U2af1Q9D883 Retreg1-206ENSMUST00000228306 1430 ntBASIC16.58■□□□□ 0.24
U2af1Q9D883 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
U2af1Q9D883 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
U2af1Q9D883 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
U2af1Q9D883 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
U2af1Q9D883 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
U2af1Q9D883 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
U2af1Q9D883 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
U2af1Q9D883 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
U2af1Q9D883 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC16.58■□□□□ 0.24
U2af1Q9D883 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
U2af1Q9D883 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
U2af1Q9D883 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
U2af1Q9D883 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
U2af1Q9D883 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
U2af1Q9D883 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
U2af1Q9D883 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
U2af1Q9D883 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
U2af1Q9D883 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
U2af1Q9D883 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
U2af1Q9D883 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
U2af1Q9D883 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
U2af1Q9D883 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
U2af1Q9D883 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
U2af1Q9D883 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
U2af1Q9D883 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
U2af1Q9D883 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
U2af1Q9D883 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
U2af1Q9D883 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
U2af1Q9D883 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
U2af1Q9D883 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
U2af1Q9D883 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC16.57■□□□□ 0.24
U2af1Q9D883 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC16.57■□□□□ 0.24
U2af1Q9D883 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
U2af1Q9D883 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC16.57■□□□□ 0.24
U2af1Q9D883 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
U2af1Q9D883 Gm27320-201ENSMUST00000184892 109 ntBASIC16.57■□□□□ 0.24
U2af1Q9D883 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC16.57■□□□□ 0.24
U2af1Q9D883 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
U2af1Q9D883 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
U2af1Q9D883 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
U2af1Q9D883 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
U2af1Q9D883 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
U2af1Q9D883 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
U2af1Q9D883 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
U2af1Q9D883 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
U2af1Q9D883 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
U2af1Q9D883 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
U2af1Q9D883 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC16.57■□□□□ 0.24
U2af1Q9D883 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
U2af1Q9D883 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
U2af1Q9D883 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
U2af1Q9D883 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
U2af1Q9D883 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
U2af1Q9D883 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
U2af1Q9D883 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
U2af1Q9D883 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
U2af1Q9D883 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
U2af1Q9D883 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC16.56■□□□□ 0.24
U2af1Q9D883 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
U2af1Q9D883 Gm8862-201ENSMUST00000198379 1346 ntBASIC16.56■□□□□ 0.24
U2af1Q9D883 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC16.56■□□□□ 0.24
U2af1Q9D883 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms