Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sf3a3Q9D554 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sf3a3Q9D554 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sf3a3Q9D554 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.77□□□□□ -0.37
Sf3a3Q9D554 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sf3a3Q9D554 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sf3a3Q9D554 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sf3a3Q9D554 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.77□□□□□ -0.37
Sf3a3Q9D554 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sf3a3Q9D554 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.77□□□□□ -0.37
Sf3a3Q9D554 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.77□□□□□ -0.37
Sf3a3Q9D554 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Sf3a3Q9D554 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3a3Q9D554 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3a3Q9D554 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3a3Q9D554 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3a3Q9D554 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC12.76□□□□□ -0.37
Sf3a3Q9D554 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3a3Q9D554 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3a3Q9D554 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.76□□□□□ -0.37
Sf3a3Q9D554 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3a3Q9D554 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3a3Q9D554 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3a3Q9D554 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3a3Q9D554 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3a3Q9D554 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3a3Q9D554 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3a3Q9D554 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.76□□□□□ -0.37
Sf3a3Q9D554 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.76□□□□□ -0.37
Sf3a3Q9D554 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.76□□□□□ -0.37
Sf3a3Q9D554 Gm38294-201ENSMUST00000192831 381 ntBASIC12.76□□□□□ -0.37
Sf3a3Q9D554 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3a3Q9D554 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3a3Q9D554 Gm18905-201ENSMUST00000205454 928 ntBASIC12.76□□□□□ -0.37
Sf3a3Q9D554 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.76□□□□□ -0.37
Sf3a3Q9D554 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3a3Q9D554 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3a3Q9D554 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3a3Q9D554 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3a3Q9D554 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3a3Q9D554 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3a3Q9D554 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3a3Q9D554 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.76□□□□□ -0.37
Sf3a3Q9D554 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3a3Q9D554 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3a3Q9D554 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.76□□□□□ -0.37
Sf3a3Q9D554 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3a3Q9D554 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3a3Q9D554 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3a3Q9D554 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Sf3a3Q9D554 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3a3Q9D554 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3a3Q9D554 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.76□□□□□ -0.37
Sf3a3Q9D554 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3a3Q9D554 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3a3Q9D554 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3a3Q9D554 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sf3a3Q9D554 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3a3Q9D554 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Sf3a3Q9D554 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3a3Q9D554 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3a3Q9D554 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3a3Q9D554 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Sf3a3Q9D554 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Sf3a3Q9D554 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3a3Q9D554 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3a3Q9D554 Gm12585-201ENSMUST00000117307 290 ntBASIC12.75□□□□□ -0.37
Sf3a3Q9D554 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3a3Q9D554 Gm15653-201ENSMUST00000119247 907 ntBASIC12.75□□□□□ -0.37
Sf3a3Q9D554 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3a3Q9D554 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.75□□□□□ -0.37
Sf3a3Q9D554 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3a3Q9D554 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Sf3a3Q9D554 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.75□□□□□ -0.37
Sf3a3Q9D554 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.75□□□□□ -0.37
Sf3a3Q9D554 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3a3Q9D554 Gm27622-201ENSMUST00000183779 60 ntBASIC12.75□□□□□ -0.37
Sf3a3Q9D554 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.75□□□□□ -0.37
Sf3a3Q9D554 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.75□□□□□ -0.37
Sf3a3Q9D554 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.75□□□□□ -0.37
Sf3a3Q9D554 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.75□□□□□ -0.37
Sf3a3Q9D554 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.75□□□□□ -0.37
Sf3a3Q9D554 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3a3Q9D554 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3a3Q9D554 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3a3Q9D554 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3a3Q9D554 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3a3Q9D554 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3a3Q9D554 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Sf3a3Q9D554 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Sf3a3Q9D554 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3a3Q9D554 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3a3Q9D554 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Sf3a3Q9D554 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3a3Q9D554 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3a3Q9D554 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3a3Q9D554 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Sf3a3Q9D554 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3a3Q9D554 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Sf3a3Q9D554 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms