Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cfap53Q9D439 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cfap53Q9D439 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Cfap53Q9D439 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cfap53Q9D439 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cfap53Q9D439 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cfap53Q9D439 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cfap53Q9D439 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cfap53Q9D439 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cfap53Q9D439 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cfap53Q9D439 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.88□□□□□ -0.19
Cfap53Q9D439 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cfap53Q9D439 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.88□□□□□ -0.19
Cfap53Q9D439 Gm27682-201ENSMUST00000183930 110 ntBASIC13.88□□□□□ -0.19
Cfap53Q9D439 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.88□□□□□ -0.19
Cfap53Q9D439 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.88□□□□□ -0.19
Cfap53Q9D439 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.88□□□□□ -0.19
Cfap53Q9D439 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.88□□□□□ -0.19
Cfap53Q9D439 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Cfap53Q9D439 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cfap53Q9D439 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cfap53Q9D439 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cfap53Q9D439 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cfap53Q9D439 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.88□□□□□ -0.19
Cfap53Q9D439 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cfap53Q9D439 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cfap53Q9D439 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cfap53Q9D439 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cfap53Q9D439 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Cfap53Q9D439 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Cfap53Q9D439 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cfap53Q9D439 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cfap53Q9D439 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
Cfap53Q9D439 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Cfap53Q9D439 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cfap53Q9D439 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.88□□□□□ -0.19
Cfap53Q9D439 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Cfap53Q9D439 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cfap53Q9D439 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cfap53Q9D439 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cfap53Q9D439 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cfap53Q9D439 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cfap53Q9D439 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Cfap53Q9D439 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cfap53Q9D439 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Cfap53Q9D439 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
Cfap53Q9D439 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cfap53Q9D439 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cfap53Q9D439 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Cfap53Q9D439 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cfap53Q9D439 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cfap53Q9D439 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.87□□□□□ -0.19
Cfap53Q9D439 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Cfap53Q9D439 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.87□□□□□ -0.19
Cfap53Q9D439 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.87□□□□□ -0.19
Cfap53Q9D439 Gm18187-201ENSMUST00000196476 984 ntBASIC13.87□□□□□ -0.19
Cfap53Q9D439 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cfap53Q9D439 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.87□□□□□ -0.19
Cfap53Q9D439 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cfap53Q9D439 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.87□□□□□ -0.19
Cfap53Q9D439 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cfap53Q9D439 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Cfap53Q9D439 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cfap53Q9D439 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cfap53Q9D439 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cfap53Q9D439 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cfap53Q9D439 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cfap53Q9D439 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cfap53Q9D439 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cfap53Q9D439 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cfap53Q9D439 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cfap53Q9D439 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cfap53Q9D439 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Cfap53Q9D439 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cfap53Q9D439 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.86□□□□□ -0.19
Cfap53Q9D439 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cfap53Q9D439 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.86□□□□□ -0.19
Cfap53Q9D439 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cfap53Q9D439 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cfap53Q9D439 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cfap53Q9D439 Snord83b-201ENSMUST00000104546 94 ntBASIC13.86□□□□□ -0.19
Cfap53Q9D439 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.86□□□□□ -0.19
Cfap53Q9D439 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.86□□□□□ -0.19
Cfap53Q9D439 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.86□□□□□ -0.19
Cfap53Q9D439 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.86□□□□□ -0.19
Cfap53Q9D439 Gm32025-201ENSMUST00000217960 307 ntBASIC13.86□□□□□ -0.19
Cfap53Q9D439 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Cfap53Q9D439 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.86□□□□□ -0.19
Cfap53Q9D439 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.86□□□□□ -0.19
Cfap53Q9D439 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.86□□□□□ -0.19
Cfap53Q9D439 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cfap53Q9D439 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cfap53Q9D439 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Cfap53Q9D439 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Cfap53Q9D439 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cfap53Q9D439 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.86□□□□□ -0.19
Cfap53Q9D439 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cfap53Q9D439 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cfap53Q9D439 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cfap53Q9D439 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms