Protein–RNA interactions for Protein: Q9D394

Rufy3, Protein RUFY3, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rufy3Q9D394 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Rufy3Q9D394 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Rufy3Q9D394 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.79□□□□□ -0.04
Rufy3Q9D394 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rufy3Q9D394 Gm5863-201ENSMUST00000121760 1008 ntBASIC14.79□□□□□ -0.04
Rufy3Q9D394 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC14.79□□□□□ -0.04
Rufy3Q9D394 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rufy3Q9D394 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.79□□□□□ -0.04
Rufy3Q9D394 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rufy3Q9D394 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Rufy3Q9D394 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rufy3Q9D394 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.79□□□□□ -0.04
Rufy3Q9D394 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC14.79□□□□□ -0.04
Rufy3Q9D394 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Rufy3Q9D394 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC14.79□□□□□ -0.04
Rufy3Q9D394 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rufy3Q9D394 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.79□□□□□ -0.04
Rufy3Q9D394 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rufy3Q9D394 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rufy3Q9D394 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rufy3Q9D394 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rufy3Q9D394 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rufy3Q9D394 Gm24526-201ENSMUST00000082921 158 ntBASIC14.79□□□□□ -0.04
Rufy3Q9D394 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Rufy3Q9D394 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rufy3Q9D394 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rufy3Q9D394 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rufy3Q9D394 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rufy3Q9D394 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rufy3Q9D394 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rufy3Q9D394 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rufy3Q9D394 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rufy3Q9D394 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rufy3Q9D394 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Rufy3Q9D394 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC14.78□□□□□ -0.04
Rufy3Q9D394 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Rufy3Q9D394 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rufy3Q9D394 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rufy3Q9D394 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rufy3Q9D394 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rufy3Q9D394 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Rufy3Q9D394 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Rufy3Q9D394 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rufy3Q9D394 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.78□□□□□ -0.04
Rufy3Q9D394 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rufy3Q9D394 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rufy3Q9D394 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rufy3Q9D394 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rufy3Q9D394 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
Rufy3Q9D394 Gm10268-201ENSMUST00000085340 555 ntBASIC14.78□□□□□ -0.04
Rufy3Q9D394 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rufy3Q9D394 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rufy3Q9D394 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rufy3Q9D394 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rufy3Q9D394 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rufy3Q9D394 Gm44260-201ENSMUST00000204946 2094 ntBASIC14.78□□□□□ -0.04
Rufy3Q9D394 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rufy3Q9D394 Gm8038-201ENSMUST00000164674 2044 ntBASIC14.78□□□□□ -0.04
Rufy3Q9D394 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC14.78□□□□□ -0.04
Rufy3Q9D394 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rufy3Q9D394 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Rufy3Q9D394 Gm37472-201ENSMUST00000192342 4052 ntBASIC14.77□□□□□ -0.04
Rufy3Q9D394 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.77□□□□□ -0.04
Rufy3Q9D394 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.77□□□□□ -0.04
Rufy3Q9D394 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Rufy3Q9D394 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Rufy3Q9D394 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rufy3Q9D394 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rufy3Q9D394 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rufy3Q9D394 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC14.77□□□□□ -0.04
Rufy3Q9D394 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.77□□□□□ -0.05
Rufy3Q9D394 Gm1335-201ENSMUST00000121653 386 ntBASIC14.77□□□□□ -0.05
Rufy3Q9D394 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rufy3Q9D394 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC14.77□□□□□ -0.05
Rufy3Q9D394 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.77□□□□□ -0.05
Rufy3Q9D394 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.77□□□□□ -0.05
Rufy3Q9D394 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rufy3Q9D394 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rufy3Q9D394 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Rufy3Q9D394 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC14.77□□□□□ -0.05
Rufy3Q9D394 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rufy3Q9D394 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rufy3Q9D394 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rufy3Q9D394 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Rufy3Q9D394 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rufy3Q9D394 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rufy3Q9D394 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rufy3Q9D394 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rufy3Q9D394 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rufy3Q9D394 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rufy3Q9D394 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Rufy3Q9D394 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rufy3Q9D394 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rufy3Q9D394 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rufy3Q9D394 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rufy3Q9D394 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rufy3Q9D394 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.76□□□□□ -0.05
Rufy3Q9D394 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rufy3Q9D394 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rufy3Q9D394 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms