Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Paupar-201ENSMUST00000194826 3482 ntBASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Khdc3Q9CWU5 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Khdc3Q9CWU5 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Khdc3Q9CWU5 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Khdc3Q9CWU5 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Khdc3Q9CWU5 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Khdc3Q9CWU5 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Khdc3Q9CWU5 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Khdc3Q9CWU5 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Khdc3Q9CWU5 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Khdc3Q9CWU5 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.13□□□□□ -0.47
Khdc3Q9CWU5 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Khdc3Q9CWU5 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Khdc3Q9CWU5 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Khdc3Q9CWU5 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.13□□□□□ -0.47
Khdc3Q9CWU5 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Khdc3Q9CWU5 Gm23363-201ENSMUST00000175024 79 ntBASIC12.13□□□□□ -0.47
Khdc3Q9CWU5 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Khdc3Q9CWU5 Gm29127-201ENSMUST00000188304 517 ntBASIC12.13□□□□□ -0.47
Khdc3Q9CWU5 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Khdc3Q9CWU5 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Khdc3Q9CWU5 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Khdc3Q9CWU5 Gm8099-201ENSMUST00000200510 742 ntBASIC12.13□□□□□ -0.47
Khdc3Q9CWU5 Gm4768-201ENSMUST00000206199 686 ntBASIC12.13□□□□□ -0.47
Khdc3Q9CWU5 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Khdc3Q9CWU5 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.13□□□□□ -0.47
Khdc3Q9CWU5 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.13□□□□□ -0.47
Khdc3Q9CWU5 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Khdc3Q9CWU5 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Khdc3Q9CWU5 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.13□□□□□ -0.47
Khdc3Q9CWU5 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Khdc3Q9CWU5 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Khdc3Q9CWU5 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Khdc3Q9CWU5 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Khdc3Q9CWU5 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Khdc3Q9CWU5 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Khdc3Q9CWU5 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Khdc3Q9CWU5 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.12□□□□□ -0.47
Khdc3Q9CWU5 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Khdc3Q9CWU5 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Khdc3Q9CWU5 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Khdc3Q9CWU5 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.12□□□□□ -0.47
Khdc3Q9CWU5 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Khdc3Q9CWU5 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Khdc3Q9CWU5 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Khdc3Q9CWU5 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Khdc3Q9CWU5 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Khdc3Q9CWU5 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Khdc3Q9CWU5 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.12□□□□□ -0.47
Khdc3Q9CWU5 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Khdc3Q9CWU5 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Khdc3Q9CWU5 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Khdc3Q9CWU5 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Khdc3Q9CWU5 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Khdc3Q9CWU5 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Khdc3Q9CWU5 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Khdc3Q9CWU5 Gm43818-201ENSMUST00000200605 466 ntBASIC12.12□□□□□ -0.47
Khdc3Q9CWU5 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.12□□□□□ -0.47
Khdc3Q9CWU5 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Khdc3Q9CWU5 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Khdc3Q9CWU5 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Khdc3Q9CWU5 Gm10268-201ENSMUST00000085340 555 ntBASIC12.12□□□□□ -0.47
Khdc3Q9CWU5 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Khdc3Q9CWU5 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Khdc3Q9CWU5 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Khdc3Q9CWU5 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Khdc3Q9CWU5 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Khdc3Q9CWU5 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Khdc3Q9CWU5 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Khdc3Q9CWU5 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Khdc3Q9CWU5 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.12□□□□□ -0.47
Khdc3Q9CWU5 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Khdc3Q9CWU5 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Khdc3Q9CWU5 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Khdc3Q9CWU5 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Khdc3Q9CWU5 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.12□□□□□ -0.47
Khdc3Q9CWU5 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms