Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 Gm23085-201ENSMUST00000157849 293 ntBASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 Gm25072-201ENSMUST00000175233 235 ntBASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 Gm26448-201ENSMUST00000082446 203 ntBASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Cldnd1Q9CQX5 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cldnd1Q9CQX5 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cldnd1Q9CQX5 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cldnd1Q9CQX5 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Cldnd1Q9CQX5 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cldnd1Q9CQX5 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.87□□□□□ -0.35
Cldnd1Q9CQX5 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cldnd1Q9CQX5 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cldnd1Q9CQX5 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cldnd1Q9CQX5 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Cldnd1Q9CQX5 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cldnd1Q9CQX5 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.87□□□□□ -0.35
Cldnd1Q9CQX5 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cldnd1Q9CQX5 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cldnd1Q9CQX5 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Cldnd1Q9CQX5 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Cldnd1Q9CQX5 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Cldnd1Q9CQX5 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.87□□□□□ -0.35
Cldnd1Q9CQX5 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC12.87□□□□□ -0.35
Cldnd1Q9CQX5 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cldnd1Q9CQX5 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cldnd1Q9CQX5 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cldnd1Q9CQX5 Gm8492-201ENSMUST00000182375 987 ntBASIC12.87□□□□□ -0.35
Cldnd1Q9CQX5 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC12.87□□□□□ -0.35
Cldnd1Q9CQX5 Gm34023-201ENSMUST00000195539 217 ntBASIC12.87□□□□□ -0.35
Cldnd1Q9CQX5 Gm43184-201ENSMUST00000197247 542 ntBASIC12.87□□□□□ -0.35
Cldnd1Q9CQX5 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Cldnd1Q9CQX5 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cldnd1Q9CQX5 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cldnd1Q9CQX5 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Cldnd1Q9CQX5 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cldnd1Q9CQX5 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cldnd1Q9CQX5 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cldnd1Q9CQX5 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.87□□□□□ -0.35
Cldnd1Q9CQX5 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cldnd1Q9CQX5 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cldnd1Q9CQX5 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cldnd1Q9CQX5 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC12.87□□□□□ -0.35
Cldnd1Q9CQX5 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.86□□□□□ -0.35
Cldnd1Q9CQX5 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 104.5 ms