Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Retreg3Q9CQV4 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Retreg3Q9CQV4 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retreg3Q9CQV4 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.01□□□□□ -0.33
Retreg3Q9CQV4 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retreg3Q9CQV4 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retreg3Q9CQV4 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.01□□□□□ -0.33
Retreg3Q9CQV4 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retreg3Q9CQV4 Snord83b-201ENSMUST00000104546 94 ntBASIC13.01□□□□□ -0.33
Retreg3Q9CQV4 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC13.01□□□□□ -0.33
Retreg3Q9CQV4 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC13.01□□□□□ -0.33
Retreg3Q9CQV4 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC13.01□□□□□ -0.33
Retreg3Q9CQV4 Gm6013-201ENSMUST00000212264 699 ntBASIC13.01□□□□□ -0.33
Retreg3Q9CQV4 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.01□□□□□ -0.33
Retreg3Q9CQV4 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.01□□□□□ -0.33
Retreg3Q9CQV4 AC174797.4-201ENSMUST00000225510 347 ntBASIC13.01□□□□□ -0.33
Retreg3Q9CQV4 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retreg3Q9CQV4 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retreg3Q9CQV4 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retreg3Q9CQV4 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.01□□□□□ -0.33
Retreg3Q9CQV4 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retreg3Q9CQV4 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retreg3Q9CQV4 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retreg3Q9CQV4 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retreg3Q9CQV4 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.01□□□□□ -0.33
Retreg3Q9CQV4 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retreg3Q9CQV4 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.01□□□□□ -0.33
Retreg3Q9CQV4 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retreg3Q9CQV4 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retreg3Q9CQV4 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retreg3Q9CQV4 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.01□□□□□ -0.33
Retreg3Q9CQV4 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retreg3Q9CQV4 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retreg3Q9CQV4 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retreg3Q9CQV4 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retreg3Q9CQV4 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retreg3Q9CQV4 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retreg3Q9CQV4 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retreg3Q9CQV4 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Retreg3Q9CQV4 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Retreg3Q9CQV4 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Retreg3Q9CQV4 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Retreg3Q9CQV4 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13□□□□□ -0.33
Retreg3Q9CQV4 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retreg3Q9CQV4 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retreg3Q9CQV4 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retreg3Q9CQV4 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retreg3Q9CQV4 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13□□□□□ -0.33
Retreg3Q9CQV4 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13□□□□□ -0.33
Retreg3Q9CQV4 Gm45643-201ENSMUST00000211364 1484 ntBASIC13□□□□□ -0.33
Retreg3Q9CQV4 Ctsll3-201ENSMUST00000043754 1337 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retreg3Q9CQV4 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Retreg3Q9CQV4 Gm9506-201ENSMUST00000118516 320 ntBASIC13□□□□□ -0.33
Retreg3Q9CQV4 Gm12363-201ENSMUST00000122250 668 ntBASIC13□□□□□ -0.33
Retreg3Q9CQV4 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Retreg3Q9CQV4 Gm27682-201ENSMUST00000183930 110 ntBASIC13□□□□□ -0.33
Retreg3Q9CQV4 Gm37452-201ENSMUST00000194416 1160 ntBASIC13□□□□□ -0.33
Retreg3Q9CQV4 Gm37809-201ENSMUST00000195050 931 ntBASIC13□□□□□ -0.33
Retreg3Q9CQV4 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retreg3Q9CQV4 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retreg3Q9CQV4 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retreg3Q9CQV4 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retreg3Q9CQV4 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Retreg3Q9CQV4 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Retreg3Q9CQV4 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retreg3Q9CQV4 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retreg3Q9CQV4 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retreg3Q9CQV4 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Retreg3Q9CQV4 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13□□□□□ -0.33
Retreg3Q9CQV4 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retreg3Q9CQV4 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retreg3Q9CQV4 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retreg3Q9CQV4 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Retreg3Q9CQV4 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Retreg3Q9CQV4 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retreg3Q9CQV4 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retreg3Q9CQV4 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retreg3Q9CQV4 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Retreg3Q9CQV4 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retreg3Q9CQV4 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Retreg3Q9CQV4 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Retreg3Q9CQV4 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retreg3Q9CQV4 Gm37234-201ENSMUST00000193259 1441 ntBASIC12.99□□□□□ -0.33
Retreg3Q9CQV4 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retreg3Q9CQV4 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retreg3Q9CQV4 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Retreg3Q9CQV4 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retreg3Q9CQV4 Gm7171-201ENSMUST00000177413 1349 ntBASIC12.99□□□□□ -0.33
Retreg3Q9CQV4 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retreg3Q9CQV4 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Retreg3Q9CQV4 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC12.99□□□□□ -0.33
Retreg3Q9CQV4 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Retreg3Q9CQV4 Gm2231-201ENSMUST00000125661 612 ntBASIC12.99□□□□□ -0.33
Retreg3Q9CQV4 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.99□□□□□ -0.33
Retreg3Q9CQV4 Gm13844-201ENSMUST00000134541 581 ntTSL 3 BASIC12.99□□□□□ -0.33
Retreg3Q9CQV4 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Retreg3Q9CQV4 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.99□□□□□ -0.33
Retreg3Q9CQV4 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retreg3Q9CQV4 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.99□□□□□ -0.33
Retreg3Q9CQV4 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms