Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Gm12859-201ENSMUST00000117834 427 ntBASIC11.96□□□□□ -0.49
Ska1Q9CPV1 Gm13689-201ENSMUST00000119360 685 ntBASIC11.96□□□□□ -0.49
Ska1Q9CPV1 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Ska1Q9CPV1 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ska1Q9CPV1 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ska1Q9CPV1 Mir6392-201ENSMUST00000184924 108 ntBASIC11.96□□□□□ -0.49
Ska1Q9CPV1 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.96□□□□□ -0.49
Ska1Q9CPV1 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.96□□□□□ -0.49
Ska1Q9CPV1 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Ska1Q9CPV1 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ska1Q9CPV1 Gm18624-201ENSMUST00000220966 658 ntBASIC11.96□□□□□ -0.49
Ska1Q9CPV1 Itm2b-204ENSMUST00000228637 783 ntBASIC11.96□□□□□ -0.49
Ska1Q9CPV1 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ska1Q9CPV1 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ska1Q9CPV1 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.96□□□□□ -0.5
Ska1Q9CPV1 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ska1Q9CPV1 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Ska1Q9CPV1 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ska1Q9CPV1 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Ska1Q9CPV1 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ska1Q9CPV1 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Ska1Q9CPV1 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ska1Q9CPV1 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Ska1Q9CPV1 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.96□□□□□ -0.5
Ska1Q9CPV1 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Ska1Q9CPV1 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Gm15429-201ENSMUST00000151268 798 ntBASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Gm5866-201ENSMUST00000177881 973 ntBASIC11.95□□□□□ -0.5
Ska1Q9CPV1 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.95□□□□□ -0.5
Ska1Q9CPV1 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.94□□□□□ -0.5
Ska1Q9CPV1 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ska1Q9CPV1 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.94□□□□□ -0.5
Ska1Q9CPV1 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.94□□□□□ -0.5
Ska1Q9CPV1 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ska1Q9CPV1 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Ska1Q9CPV1 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ska1Q9CPV1 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ska1Q9CPV1 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Ska1Q9CPV1 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ska1Q9CPV1 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.94□□□□□ -0.5
Ska1Q9CPV1 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.94□□□□□ -0.5
Ska1Q9CPV1 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Ska1Q9CPV1 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ska1Q9CPV1 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ska1Q9CPV1 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.94□□□□□ -0.5
Ska1Q9CPV1 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ska1Q9CPV1 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ska1Q9CPV1 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ska1Q9CPV1 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ska1Q9CPV1 Gm16372-201ENSMUST00000073088 450 ntBASIC11.94□□□□□ -0.5
Ska1Q9CPV1 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ska1Q9CPV1 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.94□□□□□ -0.5
Ska1Q9CPV1 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms