Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Krt88Q9CPR6 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Krt88Q9CPR6 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Krt88Q9CPR6 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Krt88Q9CPR6 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Krt88Q9CPR6 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Krt88Q9CPR6 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Krt88Q9CPR6 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Krt88Q9CPR6 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Krt88Q9CPR6 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Krt88Q9CPR6 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Krt88Q9CPR6 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Krt88Q9CPR6 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Krt88Q9CPR6 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.4□□□□□ -0.59
Krt88Q9CPR6 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Krt88Q9CPR6 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Krt88Q9CPR6 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.39□□□□□ -0.59
Krt88Q9CPR6 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Krt88Q9CPR6 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.39□□□□□ -0.59
Krt88Q9CPR6 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Krt88Q9CPR6 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Krt88Q9CPR6 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Krt88Q9CPR6 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Krt88Q9CPR6 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Krt88Q9CPR6 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Krt88Q9CPR6 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Krt88Q9CPR6 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Krt88Q9CPR6 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Krt88Q9CPR6 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC11.39□□□□□ -0.59
Krt88Q9CPR6 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Krt88Q9CPR6 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Krt88Q9CPR6 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Krt88Q9CPR6 Gm15371-201ENSMUST00000117057 784 ntBASIC11.39□□□□□ -0.59
Krt88Q9CPR6 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.39□□□□□ -0.59
Krt88Q9CPR6 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.39□□□□□ -0.59
Krt88Q9CPR6 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.39□□□□□ -0.59
Krt88Q9CPR6 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Krt88Q9CPR6 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Krt88Q9CPR6 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Krt88Q9CPR6 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Krt88Q9CPR6 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Krt88Q9CPR6 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Krt88Q9CPR6 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.39□□□□□ -0.59
Krt88Q9CPR6 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC11.39□□□□□ -0.59
Krt88Q9CPR6 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.39□□□□□ -0.59
Krt88Q9CPR6 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Krt88Q9CPR6 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Krt88Q9CPR6 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Krt88Q9CPR6 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Krt88Q9CPR6 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Krt88Q9CPR6 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.39□□□□□ -0.59
Krt88Q9CPR6 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Krt88Q9CPR6 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Krt88Q9CPR6 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Krt88Q9CPR6 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Krt88Q9CPR6 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Krt88Q9CPR6 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Krt88Q9CPR6 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Krt88Q9CPR6 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Krt88Q9CPR6 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Krt88Q9CPR6 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Krt88Q9CPR6 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.38□□□□□ -0.59
Krt88Q9CPR6 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Krt88Q9CPR6 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Krt88Q9CPR6 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Krt88Q9CPR6 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Krt88Q9CPR6 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Krt88Q9CPR6 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Krt88Q9CPR6 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Krt88Q9CPR6 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Krt88Q9CPR6 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Krt88Q9CPR6 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Krt88Q9CPR6 Gm16202-201ENSMUST00000117532 544 ntBASIC11.38□□□□□ -0.59
Krt88Q9CPR6 Gm12291-201ENSMUST00000121627 311 ntBASIC11.38□□□□□ -0.59
Krt88Q9CPR6 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.38□□□□□ -0.59
Krt88Q9CPR6 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Krt88Q9CPR6 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.38□□□□□ -0.59
Krt88Q9CPR6 Mir7023-201ENSMUST00000185093 64 ntBASIC11.38□□□□□ -0.59
Krt88Q9CPR6 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.38□□□□□ -0.59
Krt88Q9CPR6 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Krt88Q9CPR6 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.38□□□□□ -0.59
Krt88Q9CPR6 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC11.38□□□□□ -0.59
Krt88Q9CPR6 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Krt88Q9CPR6 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Krt88Q9CPR6 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Krt88Q9CPR6 Gm20445-201ENSMUST00000061905 565 ntBASIC11.38□□□□□ -0.59
Krt88Q9CPR6 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Krt88Q9CPR6 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Krt88Q9CPR6 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Krt88Q9CPR6 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Krt88Q9CPR6 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Krt88Q9CPR6 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Krt88Q9CPR6 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Krt88Q9CPR6 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Krt88Q9CPR6 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Krt88Q9CPR6 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Krt88Q9CPR6 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Krt88Q9CPR6 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Krt88Q9CPR6 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Krt88Q9CPR6 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms