Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim16Q99PP9 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim16Q99PP9 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim16Q99PP9 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim16Q99PP9 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim16Q99PP9 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim16Q99PP9 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim16Q99PP9 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim16Q99PP9 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim16Q99PP9 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim16Q99PP9 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim16Q99PP9 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim16Q99PP9 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim16Q99PP9 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim16Q99PP9 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim16Q99PP9 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim16Q99PP9 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.37□□□□□ -0.43
Trim16Q99PP9 Gm29649-201ENSMUST00000185649 419 ntBASIC12.37□□□□□ -0.43
Trim16Q99PP9 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim16Q99PP9 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.37□□□□□ -0.43
Trim16Q99PP9 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim16Q99PP9 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.37□□□□□ -0.43
Trim16Q99PP9 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.37□□□□□ -0.43
Trim16Q99PP9 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim16Q99PP9 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.37□□□□□ -0.43
Trim16Q99PP9 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trim16Q99PP9 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.37□□□□□ -0.43
Trim16Q99PP9 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim16Q99PP9 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.37□□□□□ -0.43
Trim16Q99PP9 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.37□□□□□ -0.43
Trim16Q99PP9 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.37□□□□□ -0.43
Trim16Q99PP9 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim16Q99PP9 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim16Q99PP9 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.37□□□□□ -0.43
Trim16Q99PP9 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim16Q99PP9 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim16Q99PP9 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim16Q99PP9 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim16Q99PP9 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim16Q99PP9 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim16Q99PP9 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim16Q99PP9 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim16Q99PP9 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim16Q99PP9 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim16Q99PP9 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim16Q99PP9 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim16Q99PP9 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim16Q99PP9 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trim16Q99PP9 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim16Q99PP9 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim16Q99PP9 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trim16Q99PP9 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim16Q99PP9 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trim16Q99PP9 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim16Q99PP9 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim16Q99PP9 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim16Q99PP9 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim16Q99PP9 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim16Q99PP9 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trim16Q99PP9 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Trim16Q99PP9 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trim16Q99PP9 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.36□□□□□ -0.43
Trim16Q99PP9 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim16Q99PP9 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim16Q99PP9 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim16Q99PP9 Gm13369-201ENSMUST00000119442 987 ntBASIC12.36□□□□□ -0.43
Trim16Q99PP9 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.36□□□□□ -0.43
Trim16Q99PP9 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim16Q99PP9 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim16Q99PP9 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim16Q99PP9 Gm29127-201ENSMUST00000188304 517 ntBASIC12.36□□□□□ -0.43
Trim16Q99PP9 Gm37497-201ENSMUST00000195830 798 ntBASIC12.36□□□□□ -0.43
Trim16Q99PP9 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trim16Q99PP9 Gm19931-201ENSMUST00000198920 368 ntBASIC12.36□□□□□ -0.43
Trim16Q99PP9 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.36□□□□□ -0.43
Trim16Q99PP9 Gm6266-201ENSMUST00000203844 806 ntBASIC12.36□□□□□ -0.43
Trim16Q99PP9 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trim16Q99PP9 Gm29705-201ENSMUST00000212598 474 ntBASIC12.36□□□□□ -0.43
Trim16Q99PP9 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim16Q99PP9 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.36□□□□□ -0.43
Trim16Q99PP9 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim16Q99PP9 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim16Q99PP9 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Trim16Q99PP9 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim16Q99PP9 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim16Q99PP9 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim16Q99PP9 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.36□□□□□ -0.43
Trim16Q99PP9 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim16Q99PP9 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Trim16Q99PP9 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim16Q99PP9 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim16Q99PP9 AC122291.1-201ENSMUST00000228937 5748 ntBASIC12.36□□□□□ -0.43
Trim16Q99PP9 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim16Q99PP9 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.36□□□□□ -0.43
Trim16Q99PP9 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Trim16Q99PP9 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim16Q99PP9 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim16Q99PP9 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Trim16Q99PP9 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim16Q99PP9 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms