Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim33Q99PP7 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim33Q99PP7 Gm26927-201ENSMUST00000182385 965 ntBASIC12.61□□□□□ -0.39
Trim33Q99PP7 Gm27731-201ENSMUST00000185192 107 ntBASIC12.61□□□□□ -0.39
Trim33Q99PP7 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.61□□□□□ -0.39
Trim33Q99PP7 Gm35638-201ENSMUST00000220724 652 ntBASIC12.61□□□□□ -0.39
Trim33Q99PP7 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim33Q99PP7 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim33Q99PP7 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim33Q99PP7 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim33Q99PP7 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trim33Q99PP7 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim33Q99PP7 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.61□□□□□ -0.39
Trim33Q99PP7 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim33Q99PP7 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim33Q99PP7 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim33Q99PP7 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim33Q99PP7 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim33Q99PP7 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim33Q99PP7 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim33Q99PP7 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim33Q99PP7 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim33Q99PP7 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.6□□□□□ -0.39
Trim33Q99PP7 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim33Q99PP7 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim33Q99PP7 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim33Q99PP7 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim33Q99PP7 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim33Q99PP7 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim33Q99PP7 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim33Q99PP7 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim33Q99PP7 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trim33Q99PP7 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim33Q99PP7 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim33Q99PP7 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim33Q99PP7 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim33Q99PP7 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim33Q99PP7 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trim33Q99PP7 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim33Q99PP7 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Trim33Q99PP7 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.6□□□□□ -0.39
Trim33Q99PP7 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.6□□□□□ -0.39
Trim33Q99PP7 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.6□□□□□ -0.39
Trim33Q99PP7 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim33Q99PP7 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC12.6□□□□□ -0.39
Trim33Q99PP7 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.6□□□□□ -0.39
Trim33Q99PP7 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.6□□□□□ -0.39
Trim33Q99PP7 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.6□□□□□ -0.39
Trim33Q99PP7 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trim33Q99PP7 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.6□□□□□ -0.39
Trim33Q99PP7 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trim33Q99PP7 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim33Q99PP7 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim33Q99PP7 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trim33Q99PP7 Gm25857-201ENSMUST00000082788 129 ntBASIC12.6□□□□□ -0.39
Trim33Q99PP7 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.6□□□□□ -0.39
Trim33Q99PP7 Gm10268-201ENSMUST00000085340 555 ntBASIC12.6□□□□□ -0.39
Trim33Q99PP7 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trim33Q99PP7 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim33Q99PP7 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trim33Q99PP7 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim33Q99PP7 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim33Q99PP7 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.6□□□□□ -0.39
Trim33Q99PP7 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim33Q99PP7 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.6□□□□□ -0.39
Trim33Q99PP7 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim33Q99PP7 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim33Q99PP7 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim33Q99PP7 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim33Q99PP7 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim33Q99PP7 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trim33Q99PP7 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim33Q99PP7 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim33Q99PP7 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trim33Q99PP7 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.59□□□□□ -0.39
Trim33Q99PP7 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim33Q99PP7 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim33Q99PP7 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim33Q99PP7 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim33Q99PP7 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim33Q99PP7 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trim33Q99PP7 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trim33Q99PP7 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim33Q99PP7 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim33Q99PP7 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trim33Q99PP7 Gm12363-201ENSMUST00000122250 668 ntBASIC12.59□□□□□ -0.39
Trim33Q99PP7 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.59□□□□□ -0.39
Trim33Q99PP7 Mir1982-201ENSMUST00000157368 74 ntBASIC12.59□□□□□ -0.39
Trim33Q99PP7 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.59□□□□□ -0.39
Trim33Q99PP7 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim33Q99PP7 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim33Q99PP7 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim33Q99PP7 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim33Q99PP7 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim33Q99PP7 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim33Q99PP7 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trim33Q99PP7 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.59□□□□□ -0.39
Trim33Q99PP7 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim33Q99PP7 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim33Q99PP7 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms