Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim8Q99PJ2 AC154532.1-201ENSMUST00000227860 965 ntBASIC12.39□□□□□ -0.43
Trim8Q99PJ2 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.39□□□□□ -0.43
Trim8Q99PJ2 Itm2b-204ENSMUST00000228637 783 ntBASIC12.39□□□□□ -0.43
Trim8Q99PJ2 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim8Q99PJ2 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim8Q99PJ2 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trim8Q99PJ2 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim8Q99PJ2 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim8Q99PJ2 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trim8Q99PJ2 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim8Q99PJ2 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.39□□□□□ -0.43
Trim8Q99PJ2 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.39□□□□□ -0.43
Trim8Q99PJ2 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Trim8Q99PJ2 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim8Q99PJ2 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim8Q99PJ2 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim8Q99PJ2 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim8Q99PJ2 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim8Q99PJ2 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim8Q99PJ2 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim8Q99PJ2 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Trim8Q99PJ2 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trim8Q99PJ2 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim8Q99PJ2 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim8Q99PJ2 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim8Q99PJ2 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim8Q99PJ2 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trim8Q99PJ2 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim8Q99PJ2 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim8Q99PJ2 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim8Q99PJ2 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim8Q99PJ2 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim8Q99PJ2 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim8Q99PJ2 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim8Q99PJ2 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.38□□□□□ -0.43
Trim8Q99PJ2 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.38□□□□□ -0.43
Trim8Q99PJ2 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
Trim8Q99PJ2 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trim8Q99PJ2 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim8Q99PJ2 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim8Q99PJ2 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim8Q99PJ2 Gm5687-201ENSMUST00000118252 640 ntBASIC12.38□□□□□ -0.43
Trim8Q99PJ2 Gm14928-201ENSMUST00000120198 477 ntBASIC12.38□□□□□ -0.43
Trim8Q99PJ2 Gm13813-201ENSMUST00000120998 787 ntBASIC12.38□□□□□ -0.43
Trim8Q99PJ2 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Trim8Q99PJ2 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Trim8Q99PJ2 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.38□□□□□ -0.43
Trim8Q99PJ2 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.38□□□□□ -0.43
Trim8Q99PJ2 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.38□□□□□ -0.43
Trim8Q99PJ2 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.38□□□□□ -0.43
Trim8Q99PJ2 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.38□□□□□ -0.43
Trim8Q99PJ2 Gm5186-201ENSMUST00000218781 920 ntBASIC12.38□□□□□ -0.43
Trim8Q99PJ2 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.38□□□□□ -0.43
Trim8Q99PJ2 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Trim8Q99PJ2 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trim8Q99PJ2 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim8Q99PJ2 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim8Q99PJ2 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim8Q99PJ2 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim8Q99PJ2 Gm10686-201ENSMUST00000215389 3247 ntBASIC12.38□□□□□ -0.43
Trim8Q99PJ2 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim8Q99PJ2 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.38□□□□□ -0.43
Trim8Q99PJ2 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim8Q99PJ2 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trim8Q99PJ2 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trim8Q99PJ2 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim8Q99PJ2 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim8Q99PJ2 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim8Q99PJ2 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim8Q99PJ2 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim8Q99PJ2 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim8Q99PJ2 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim8Q99PJ2 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.38□□□□□ -0.43
Trim8Q99PJ2 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim8Q99PJ2 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim8Q99PJ2 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim8Q99PJ2 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trim8Q99PJ2 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim8Q99PJ2 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim8Q99PJ2 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim8Q99PJ2 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim8Q99PJ2 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim8Q99PJ2 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim8Q99PJ2 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim8Q99PJ2 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim8Q99PJ2 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim8Q99PJ2 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trim8Q99PJ2 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim8Q99PJ2 Gm44397-201ENSMUST00000195950 113 ntBASIC12.37□□□□□ -0.43
Trim8Q99PJ2 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.37□□□□□ -0.43
Trim8Q99PJ2 Gm44124-201ENSMUST00000204159 472 ntBASIC12.37□□□□□ -0.43
Trim8Q99PJ2 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim8Q99PJ2 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim8Q99PJ2 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim8Q99PJ2 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim8Q99PJ2 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim8Q99PJ2 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.37□□□□□ -0.43
Trim8Q99PJ2 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.37□□□□□ -0.43
Trim8Q99PJ2 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms