Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdh23Q99PF4 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.51□□□□□ -0.41
Cdh23Q99PF4 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdh23Q99PF4 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdh23Q99PF4 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.51□□□□□ -0.41
Cdh23Q99PF4 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.51□□□□□ -0.41
Cdh23Q99PF4 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdh23Q99PF4 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.51□□□□□ -0.41
Cdh23Q99PF4 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Cdh23Q99PF4 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC12.5□□□□□ -0.41
Cdh23Q99PF4 Gm3017-201ENSMUST00000203603 1126 ntBASIC12.5□□□□□ -0.41
Cdh23Q99PF4 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.5□□□□□ -0.41
Cdh23Q99PF4 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh23Q99PF4 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.5□□□□□ -0.41
Cdh23Q99PF4 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh23Q99PF4 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.5□□□□□ -0.41
Cdh23Q99PF4 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Cdh23Q99PF4 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh23Q99PF4 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh23Q99PF4 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.5□□□□□ -0.41
Cdh23Q99PF4 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh23Q99PF4 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Cdh23Q99PF4 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh23Q99PF4 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh23Q99PF4 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cdh23Q99PF4 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Cdh23Q99PF4 Gm8815-201ENSMUST00000173809 620 ntBASIC12.5□□□□□ -0.41
Cdh23Q99PF4 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC12.5□□□□□ -0.41
Cdh23Q99PF4 Gm7238-201ENSMUST00000206467 973 ntBASIC12.5□□□□□ -0.41
Cdh23Q99PF4 AC130477.1-201ENSMUST00000226982 420 ntBASIC12.5□□□□□ -0.41
Cdh23Q99PF4 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh23Q99PF4 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh23Q99PF4 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh23Q99PF4 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.5□□□□□ -0.41
Cdh23Q99PF4 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh23Q99PF4 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh23Q99PF4 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh23Q99PF4 Gm11500-201ENSMUST00000118237 601 ntBASIC12.5□□□□□ -0.41
Cdh23Q99PF4 Gm12712-201ENSMUST00000120676 801 ntBASIC12.5□□□□□ -0.41
Cdh23Q99PF4 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC12.5□□□□□ -0.41
Cdh23Q99PF4 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh23Q99PF4 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh23Q99PF4 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh23Q99PF4 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh23Q99PF4 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdh23Q99PF4 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh23Q99PF4 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh23Q99PF4 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh23Q99PF4 Gm7722-201ENSMUST00000120646 741 ntBASIC12.49□□□□□ -0.41
Cdh23Q99PF4 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC12.49□□□□□ -0.41
Cdh23Q99PF4 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh23Q99PF4 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC12.49□□□□□ -0.41
Cdh23Q99PF4 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh23Q99PF4 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh23Q99PF4 Gm9661-201ENSMUST00000221611 1122 ntBASIC12.49□□□□□ -0.41
Cdh23Q99PF4 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.49□□□□□ -0.41
Cdh23Q99PF4 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Cdh23Q99PF4 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh23Q99PF4 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh23Q99PF4 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh23Q99PF4 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Cdh23Q99PF4 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh23Q99PF4 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh23Q99PF4 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh23Q99PF4 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh23Q99PF4 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh23Q99PF4 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC12.49□□□□□ -0.41
Cdh23Q99PF4 Gm9135-201ENSMUST00000182963 990 ntBASIC12.49□□□□□ -0.41
Cdh23Q99PF4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC12.49□□□□□ -0.41
Cdh23Q99PF4 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Cdh23Q99PF4 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Cdh23Q99PF4 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh23Q99PF4 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh23Q99PF4 Gm6170-201ENSMUST00000187672 1388 ntBASIC12.49□□□□□ -0.41
Cdh23Q99PF4 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh23Q99PF4 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh23Q99PF4 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh23Q99PF4 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh23Q99PF4 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Cdh23Q99PF4 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh23Q99PF4 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh23Q99PF4 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh23Q99PF4 Mir6973a-201ENSMUST00000183646 78 ntBASIC12.49□□□□□ -0.41
Cdh23Q99PF4 Gm4811-201ENSMUST00000220879 1220 ntBASIC12.49□□□□□ -0.41
Cdh23Q99PF4 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh23Q99PF4 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh23Q99PF4 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh23Q99PF4 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh23Q99PF4 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Cdh23Q99PF4 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh23Q99PF4 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh23Q99PF4 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh23Q99PF4 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cdh23Q99PF4 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.48□□□□□ -0.41
Cdh23Q99PF4 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh23Q99PF4 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.48□□□□□ -0.41
Cdh23Q99PF4 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh23Q99PF4 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh23Q99PF4 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cdh23Q99PF4 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms