Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col25a1Q99MQ5 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col25a1Q99MQ5 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col25a1Q99MQ5 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col25a1Q99MQ5 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col25a1Q99MQ5 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col25a1Q99MQ5 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.1□□□□□ -0.31
Col25a1Q99MQ5 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col25a1Q99MQ5 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col25a1Q99MQ5 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.1□□□□□ -0.31
Col25a1Q99MQ5 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.1□□□□□ -0.31
Col25a1Q99MQ5 Gm14314-201ENSMUST00000118225 1015 ntBASIC13.1□□□□□ -0.31
Col25a1Q99MQ5 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC13.1□□□□□ -0.31
Col25a1Q99MQ5 Gm15573-201ENSMUST00000119487 540 ntBASIC13.1□□□□□ -0.31
Col25a1Q99MQ5 Gm11246-201ENSMUST00000120880 345 ntBASIC13.1□□□□□ -0.31
Col25a1Q99MQ5 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.1□□□□□ -0.31
Col25a1Q99MQ5 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col25a1Q99MQ5 Gm6963-201ENSMUST00000147879 379 ntBASIC13.1□□□□□ -0.31
Col25a1Q99MQ5 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Col25a1Q99MQ5 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col25a1Q99MQ5 Gm27627-201ENSMUST00000183644 150 ntBASIC13.1□□□□□ -0.31
Col25a1Q99MQ5 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC13.1□□□□□ -0.31
Col25a1Q99MQ5 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC13.1□□□□□ -0.31
Col25a1Q99MQ5 Gm45500-201ENSMUST00000211676 803 ntBASIC13.1□□□□□ -0.31
Col25a1Q99MQ5 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.1□□□□□ -0.31
Col25a1Q99MQ5 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.1□□□□□ -0.31
Col25a1Q99MQ5 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col25a1Q99MQ5 Ginm1-202ENSMUST00000065124 300 ntBASIC13.1□□□□□ -0.31
Col25a1Q99MQ5 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC13.1□□□□□ -0.31
Col25a1Q99MQ5 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col25a1Q99MQ5 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col25a1Q99MQ5 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col25a1Q99MQ5 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col25a1Q99MQ5 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col25a1Q99MQ5 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col25a1Q99MQ5 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC13.1□□□□□ -0.31
Col25a1Q99MQ5 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col25a1Q99MQ5 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col25a1Q99MQ5 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col25a1Q99MQ5 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col25a1Q99MQ5 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.1□□□□□ -0.31
Col25a1Q99MQ5 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 Gm13022-201ENSMUST00000121181 285 ntBASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 Mir1956-201ENSMUST00000157748 65 ntBASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 Gm5434-202ENSMUST00000222384 1451 ntBASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 Gm5434-201ENSMUST00000071825 1451 ntBASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col25a1Q99MQ5 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Col25a1Q99MQ5 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Col25a1Q99MQ5 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Col25a1Q99MQ5 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Col25a1Q99MQ5 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col25a1Q99MQ5 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col25a1Q99MQ5 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col25a1Q99MQ5 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col25a1Q99MQ5 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col25a1Q99MQ5 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Col25a1Q99MQ5 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms