Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.26□□□□□ -0.45
Rnf111Q99ML9 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Rnf111Q99ML9 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Gm11803-201ENSMUST00000119966 444 ntBASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Gm8810-201ENSMUST00000172895 754 ntBASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Gm19087-201ENSMUST00000191430 946 ntBASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Gm18187-201ENSMUST00000196476 984 ntBASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Gm5035-201ENSMUST00000215581 927 ntBASIC12.26□□□□□ -0.45
Rnf111Q99ML9 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.26□□□□□ -0.45
Rnf111Q99ML9 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf111Q99ML9 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf111Q99ML9 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf111Q99ML9 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.25□□□□□ -0.45
Rnf111Q99ML9 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf111Q99ML9 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf111Q99ML9 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.25□□□□□ -0.45
Rnf111Q99ML9 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.25□□□□□ -0.45
Rnf111Q99ML9 Gm8213-201ENSMUST00000118191 441 ntBASIC12.25□□□□□ -0.45
Rnf111Q99ML9 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf111Q99ML9 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.25□□□□□ -0.45
Rnf111Q99ML9 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.25□□□□□ -0.45
Rnf111Q99ML9 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf111Q99ML9 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Rnf111Q99ML9 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf111Q99ML9 Gm8652-201ENSMUST00000181363 964 ntBASIC12.25□□□□□ -0.45
Rnf111Q99ML9 Gm27486-201ENSMUST00000184923 80 ntBASIC12.25□□□□□ -0.45
Rnf111Q99ML9 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.25□□□□□ -0.45
Rnf111Q99ML9 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf111Q99ML9 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf111Q99ML9 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Rnf111Q99ML9 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf111Q99ML9 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf111Q99ML9 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf111Q99ML9 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf111Q99ML9 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf111Q99ML9 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Rnf111Q99ML9 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf111Q99ML9 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf111Q99ML9 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf111Q99ML9 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf111Q99ML9 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf111Q99ML9 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf111Q99ML9 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.25□□□□□ -0.45
Rnf111Q99ML9 Map1b-203ENSMUST00000223725 2669 ntBASIC12.24□□□□□ -0.45
Rnf111Q99ML9 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.24□□□□□ -0.45
Rnf111Q99ML9 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf111Q99ML9 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf111Q99ML9 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Rnf111Q99ML9 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Rnf111Q99ML9 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Rnf111Q99ML9 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf111Q99ML9 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf111Q99ML9 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf111Q99ML9 Gm11814-201ENSMUST00000119515 929 ntBASIC12.24□□□□□ -0.45
Rnf111Q99ML9 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.24□□□□□ -0.45
Rnf111Q99ML9 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.24□□□□□ -0.45
Rnf111Q99ML9 Gm10156-201ENSMUST00000122364 462 ntBASIC12.24□□□□□ -0.45
Rnf111Q99ML9 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms