Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Gm10179-201ENSMUST00000086233 688 ntBASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Nkx6-1Q99MA9 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx6-1Q99MA9 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx6-1Q99MA9 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx6-1Q99MA9 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx6-1Q99MA9 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx6-1Q99MA9 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx6-1Q99MA9 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx6-1Q99MA9 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx6-1Q99MA9 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx6-1Q99MA9 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx6-1Q99MA9 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.87□□□□□ -0.51
Nkx6-1Q99MA9 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx6-1Q99MA9 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx6-1Q99MA9 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx6-1Q99MA9 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Nkx6-1Q99MA9 Gm12165-201ENSMUST00000117047 342 ntBASIC11.87□□□□□ -0.51
Nkx6-1Q99MA9 Gm8285-201ENSMUST00000208293 759 ntBASIC11.87□□□□□ -0.51
Nkx6-1Q99MA9 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.87□□□□□ -0.51
Nkx6-1Q99MA9 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
Nkx6-1Q99MA9 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.87□□□□□ -0.51
Nkx6-1Q99MA9 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx6-1Q99MA9 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.87□□□□□ -0.51
Nkx6-1Q99MA9 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.87□□□□□ -0.51
Nkx6-1Q99MA9 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx6-1Q99MA9 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx6-1Q99MA9 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx6-1Q99MA9 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx6-1Q99MA9 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx6-1Q99MA9 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx6-1Q99MA9 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx6-1Q99MA9 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx6-1Q99MA9 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.87□□□□□ -0.51
Nkx6-1Q99MA9 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx6-1Q99MA9 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.87□□□□□ -0.51
Nkx6-1Q99MA9 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx6-1Q99MA9 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkx6-1Q99MA9 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Nkx6-1Q99MA9 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.86□□□□□ -0.51
Nkx6-1Q99MA9 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-1Q99MA9 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Nkx6-1Q99MA9 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-1Q99MA9 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-1Q99MA9 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-1Q99MA9 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-1Q99MA9 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Nkx6-1Q99MA9 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.86□□□□□ -0.51
Nkx6-1Q99MA9 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-1Q99MA9 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Nkx6-1Q99MA9 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-1Q99MA9 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-1Q99MA9 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-1Q99MA9 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-1Q99MA9 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-1Q99MA9 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-1Q99MA9 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-1Q99MA9 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.86□□□□□ -0.51
Nkx6-1Q99MA9 Gm13045-201ENSMUST00000119019 712 ntBASIC11.86□□□□□ -0.51
Nkx6-1Q99MA9 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-1Q99MA9 Gm12029-201ENSMUST00000120073 832 ntBASIC11.86□□□□□ -0.51
Nkx6-1Q99MA9 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-1Q99MA9 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-1Q99MA9 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.86□□□□□ -0.51
Nkx6-1Q99MA9 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.86□□□□□ -0.51
Nkx6-1Q99MA9 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-1Q99MA9 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.86□□□□□ -0.51
Nkx6-1Q99MA9 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-1Q99MA9 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-1Q99MA9 Gm44999-201ENSMUST00000207456 1493 ntBASIC11.86□□□□□ -0.51
Nkx6-1Q99MA9 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-1Q99MA9 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-1Q99MA9 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-1Q99MA9 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-1Q99MA9 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-1Q99MA9 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-1Q99MA9 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkx6-1Q99MA9 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Nkx6-1Q99MA9 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms