Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.52■□□□□ 0.08
RtcbQ99LF4 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC15.52■□□□□ 0.08
RtcbQ99LF4 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RtcbQ99LF4 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RtcbQ99LF4 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RtcbQ99LF4 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RtcbQ99LF4 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RtcbQ99LF4 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RtcbQ99LF4 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
RtcbQ99LF4 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC15.52■□□□□ 0.08
RtcbQ99LF4 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC15.52■□□□□ 0.08
RtcbQ99LF4 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RtcbQ99LF4 Gm9022-201ENSMUST00000182482 992 ntBASIC15.52■□□□□ 0.08
RtcbQ99LF4 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC15.52■□□□□ 0.08
RtcbQ99LF4 Gm10774-201ENSMUST00000188689 204 ntBASIC15.52■□□□□ 0.08
RtcbQ99LF4 Mir7686-201ENSMUST00000200604 57 ntBASIC15.52■□□□□ 0.08
RtcbQ99LF4 Gm9132-201ENSMUST00000210182 832 ntBASIC15.52■□□□□ 0.08
RtcbQ99LF4 Gm45398-201ENSMUST00000210561 165 ntBASIC15.52■□□□□ 0.08
RtcbQ99LF4 Gm4797-201ENSMUST00000219075 1283 ntBASIC15.52■□□□□ 0.08
RtcbQ99LF4 Olfr1347-205ENSMUST00000220413 964 ntBASIC15.52■□□□□ 0.08
RtcbQ99LF4 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC15.52■□□□□ 0.08
RtcbQ99LF4 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
RtcbQ99LF4 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RtcbQ99LF4 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.52■□□□□ 0.07
RtcbQ99LF4 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RtcbQ99LF4 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RtcbQ99LF4 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
RtcbQ99LF4 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RtcbQ99LF4 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
RtcbQ99LF4 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC15.52■□□□□ 0.07
RtcbQ99LF4 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RtcbQ99LF4 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RtcbQ99LF4 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RtcbQ99LF4 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RtcbQ99LF4 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RtcbQ99LF4 Gm45342-201ENSMUST00000210903 1363 ntBASIC15.51■□□□□ 0.07
RtcbQ99LF4 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RtcbQ99LF4 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.51■□□□□ 0.07
RtcbQ99LF4 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC15.51■□□□□ 0.07
RtcbQ99LF4 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
RtcbQ99LF4 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RtcbQ99LF4 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RtcbQ99LF4 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RtcbQ99LF4 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
RtcbQ99LF4 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RtcbQ99LF4 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RtcbQ99LF4 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RtcbQ99LF4 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC15.51■□□□□ 0.07
RtcbQ99LF4 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC15.51■□□□□ 0.07
RtcbQ99LF4 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RtcbQ99LF4 Gm12795-201ENSMUST00000117594 539 ntBASIC15.51■□□□□ 0.07
RtcbQ99LF4 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC15.51■□□□□ 0.07
RtcbQ99LF4 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
RtcbQ99LF4 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC15.51■□□□□ 0.07
RtcbQ99LF4 Gm9358-201ENSMUST00000183067 927 ntBASIC15.51■□□□□ 0.07
RtcbQ99LF4 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC15.51■□□□□ 0.07
RtcbQ99LF4 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RtcbQ99LF4 Gm44958-201ENSMUST00000203734 736 ntBASIC15.51■□□□□ 0.07
RtcbQ99LF4 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
RtcbQ99LF4 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
RtcbQ99LF4 Gm18974-201ENSMUST00000221478 1031 ntBASIC15.51■□□□□ 0.07
RtcbQ99LF4 AC132901.1-201ENSMUST00000224345 508 ntBASIC15.51■□□□□ 0.07
RtcbQ99LF4 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RtcbQ99LF4 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
RtcbQ99LF4 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
RtcbQ99LF4 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
RtcbQ99LF4 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RtcbQ99LF4 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
RtcbQ99LF4 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RtcbQ99LF4 Gm7049-201ENSMUST00000223520 1712 ntBASIC15.51■□□□□ 0.07
RtcbQ99LF4 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.51■□□□□ 0.07
RtcbQ99LF4 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
RtcbQ99LF4 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RtcbQ99LF4 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RtcbQ99LF4 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RtcbQ99LF4 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RtcbQ99LF4 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RtcbQ99LF4 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.5■□□□□ 0.07
RtcbQ99LF4 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RtcbQ99LF4 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RtcbQ99LF4 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RtcbQ99LF4 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
RtcbQ99LF4 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RtcbQ99LF4 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RtcbQ99LF4 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
RtcbQ99LF4 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC15.5■□□□□ 0.07
RtcbQ99LF4 Gm8100-201ENSMUST00000182906 988 ntBASIC15.5■□□□□ 0.07
RtcbQ99LF4 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC15.5■□□□□ 0.07
RtcbQ99LF4 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC15.5■□□□□ 0.07
RtcbQ99LF4 Gm29155-201ENSMUST00000185910 269 ntBASIC15.5■□□□□ 0.07
RtcbQ99LF4 Gm38210-201ENSMUST00000191944 809 ntBASIC15.5■□□□□ 0.07
RtcbQ99LF4 Gm9463-201ENSMUST00000206707 601 ntBASIC15.5■□□□□ 0.07
RtcbQ99LF4 CT485607.1-201ENSMUST00000216100 85 ntBASIC15.5■□□□□ 0.07
RtcbQ99LF4 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RtcbQ99LF4 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RtcbQ99LF4 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RtcbQ99LF4 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
RtcbQ99LF4 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RtcbQ99LF4 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RtcbQ99LF4 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms