Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vmp1Q99KU0 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vmp1Q99KU0 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vmp1Q99KU0 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vmp1Q99KU0 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vmp1Q99KU0 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.23□□□□□ -0.45
Vmp1Q99KU0 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vmp1Q99KU0 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vmp1Q99KU0 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vmp1Q99KU0 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vmp1Q99KU0 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Vmp1Q99KU0 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Vmp1Q99KU0 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vmp1Q99KU0 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vmp1Q99KU0 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Vmp1Q99KU0 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.23□□□□□ -0.45
Vmp1Q99KU0 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vmp1Q99KU0 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.23□□□□□ -0.45
Vmp1Q99KU0 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vmp1Q99KU0 Gm12203-201ENSMUST00000118235 598 ntBASIC12.23□□□□□ -0.45
Vmp1Q99KU0 Gm11425-201ENSMUST00000119608 498 ntBASIC12.23□□□□□ -0.45
Vmp1Q99KU0 Gm12209-201ENSMUST00000120089 596 ntBASIC12.23□□□□□ -0.45
Vmp1Q99KU0 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vmp1Q99KU0 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.23□□□□□ -0.45
Vmp1Q99KU0 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vmp1Q99KU0 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vmp1Q99KU0 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vmp1Q99KU0 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vmp1Q99KU0 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vmp1Q99KU0 Gm29127-201ENSMUST00000188304 517 ntBASIC12.23□□□□□ -0.45
Vmp1Q99KU0 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.23□□□□□ -0.45
Vmp1Q99KU0 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.23□□□□□ -0.45
Vmp1Q99KU0 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vmp1Q99KU0 Gm9396-201ENSMUST00000076703 567 ntBASIC12.23□□□□□ -0.45
Vmp1Q99KU0 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vmp1Q99KU0 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vmp1Q99KU0 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Vmp1Q99KU0 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vmp1Q99KU0 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vmp1Q99KU0 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vmp1Q99KU0 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vmp1Q99KU0 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vmp1Q99KU0 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vmp1Q99KU0 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vmp1Q99KU0 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vmp1Q99KU0 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vmp1Q99KU0 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vmp1Q99KU0 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vmp1Q99KU0 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vmp1Q99KU0 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Vmp1Q99KU0 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vmp1Q99KU0 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vmp1Q99KU0 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vmp1Q99KU0 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.22□□□□□ -0.45
Vmp1Q99KU0 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vmp1Q99KU0 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vmp1Q99KU0 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.22□□□□□ -0.45
Vmp1Q99KU0 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vmp1Q99KU0 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vmp1Q99KU0 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vmp1Q99KU0 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.22□□□□□ -0.45
Vmp1Q99KU0 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vmp1Q99KU0 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vmp1Q99KU0 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vmp1Q99KU0 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Vmp1Q99KU0 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.22□□□□□ -0.45
Vmp1Q99KU0 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vmp1Q99KU0 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vmp1Q99KU0 Gm37922-201ENSMUST00000195596 455 ntBASIC12.22□□□□□ -0.45
Vmp1Q99KU0 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.22□□□□□ -0.45
Vmp1Q99KU0 Gm44069-201ENSMUST00000204898 506 ntBASIC12.22□□□□□ -0.45
Vmp1Q99KU0 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.22□□□□□ -0.45
Vmp1Q99KU0 Gm29705-201ENSMUST00000212598 474 ntBASIC12.22□□□□□ -0.45
Vmp1Q99KU0 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vmp1Q99KU0 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vmp1Q99KU0 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vmp1Q99KU0 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vmp1Q99KU0 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vmp1Q99KU0 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vmp1Q99KU0 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.22□□□□□ -0.45
Vmp1Q99KU0 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Vmp1Q99KU0 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vmp1Q99KU0 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.22□□□□□ -0.45
Vmp1Q99KU0 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vmp1Q99KU0 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vmp1Q99KU0 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vmp1Q99KU0 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vmp1Q99KU0 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.22□□□□□ -0.45
Vmp1Q99KU0 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vmp1Q99KU0 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vmp1Q99KU0 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vmp1Q99KU0 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vmp1Q99KU0 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vmp1Q99KU0 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Vmp1Q99KU0 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vmp1Q99KU0 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vmp1Q99KU0 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vmp1Q99KU0 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vmp1Q99KU0 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vmp1Q99KU0 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms