Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Thumpd1Q99J36 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Thumpd1Q99J36 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Thumpd1Q99J36 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Thumpd1Q99J36 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Thumpd1Q99J36 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Thumpd1Q99J36 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.26□□□□□ -0.61
Thumpd1Q99J36 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Thumpd1Q99J36 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Thumpd1Q99J36 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Thumpd1Q99J36 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Thumpd1Q99J36 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Thumpd1Q99J36 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Thumpd1Q99J36 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Thumpd1Q99J36 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Thumpd1Q99J36 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Thumpd1Q99J36 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Thumpd1Q99J36 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Thumpd1Q99J36 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Thumpd1Q99J36 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.25□□□□□ -0.61
Thumpd1Q99J36 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Thumpd1Q99J36 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Thumpd1Q99J36 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Thumpd1Q99J36 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Thumpd1Q99J36 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Thumpd1Q99J36 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.25□□□□□ -0.61
Thumpd1Q99J36 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Thumpd1Q99J36 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Thumpd1Q99J36 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.25□□□□□ -0.61
Thumpd1Q99J36 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Thumpd1Q99J36 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Thumpd1Q99J36 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Thumpd1Q99J36 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Thumpd1Q99J36 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.25□□□□□ -0.61
Thumpd1Q99J36 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Thumpd1Q99J36 Gm15487-201ENSMUST00000122373 465 ntBASIC11.25□□□□□ -0.61
Thumpd1Q99J36 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Thumpd1Q99J36 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Thumpd1Q99J36 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC11.25□□□□□ -0.61
Thumpd1Q99J36 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Thumpd1Q99J36 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.25□□□□□ -0.61
Thumpd1Q99J36 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Thumpd1Q99J36 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Thumpd1Q99J36 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Thumpd1Q99J36 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Thumpd1Q99J36 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Thumpd1Q99J36 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Thumpd1Q99J36 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Thumpd1Q99J36 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Thumpd1Q99J36 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Thumpd1Q99J36 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Thumpd1Q99J36 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Thumpd1Q99J36 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Thumpd1Q99J36 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Thumpd1Q99J36 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Thumpd1Q99J36 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Thumpd1Q99J36 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.24□□□□□ -0.61
Thumpd1Q99J36 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Thumpd1Q99J36 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Thumpd1Q99J36 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Thumpd1Q99J36 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Thumpd1Q99J36 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Thumpd1Q99J36 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.24□□□□□ -0.61
Thumpd1Q99J36 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.24□□□□□ -0.61
Thumpd1Q99J36 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Thumpd1Q99J36 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Thumpd1Q99J36 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Thumpd1Q99J36 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Thumpd1Q99J36 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Thumpd1Q99J36 Gm22189-201ENSMUST00000103822 86 ntBASIC11.24□□□□□ -0.61
Thumpd1Q99J36 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Thumpd1Q99J36 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.24□□□□□ -0.61
Thumpd1Q99J36 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Thumpd1Q99J36 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Thumpd1Q99J36 Mir8102-201ENSMUST00000184148 139 ntBASIC11.24□□□□□ -0.61
Thumpd1Q99J36 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Thumpd1Q99J36 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Thumpd1Q99J36 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.24□□□□□ -0.61
Thumpd1Q99J36 AC132104.2-201ENSMUST00000215011 266 ntBASIC11.24□□□□□ -0.61
Thumpd1Q99J36 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.24□□□□□ -0.61
Thumpd1Q99J36 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.24□□□□□ -0.61
Thumpd1Q99J36 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Thumpd1Q99J36 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Thumpd1Q99J36 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Thumpd1Q99J36 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.24□□□□□ -0.61
Thumpd1Q99J36 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Thumpd1Q99J36 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Thumpd1Q99J36 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Thumpd1Q99J36 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Thumpd1Q99J36 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.24□□□□□ -0.61
Thumpd1Q99J36 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Thumpd1Q99J36 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.24□□□□□ -0.61
Thumpd1Q99J36 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Thumpd1Q99J36 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Thumpd1Q99J36 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Thumpd1Q99J36 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Thumpd1Q99J36 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.24□□□□□ -0.61
Thumpd1Q99J36 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Thumpd1Q99J36 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Thumpd1Q99J36 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms